Evidence map›Paper›PMID 32160523›Full record

ArticleImmunity2020

Immune Profiling of Human Gut-Associated Lymphoid Tissue Identifies a Role for Isolated Lymphoid Follicles in Priming of Region-Specific Immunity.

Thomas M Fenton, Peter B Jørgensen, Kristoffer Niss, Samuel J S Rubin, Urs M Mörbe, Lene B Riis, Clément Da Silva, Adam Plumb, Julien Vandamme, Henrik L Jakobsen and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
6.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 136 citations in OpenAlex.

  1. Review
  2. Sequential invasion of epithelial and immune cells in Shigellosis.bioRxiv : the preprint server for biology · 2026
    Article
  3. Germinal center responses at barrier organ sites.Current opinion in immunology · 2026
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Regional and Sex-Dependent Immune Profiling Across the Colon in A Mouse Model of Ulcerative Colitis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  10. Fibroblast diversity within human gut-associated lymphoid tissues.The Journal of experimental medicine · 2026
    Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Thomas M FentonMucosal Immunology Group, Department of Health Technology, Technical University of Denmark, Kemitorvet, 2800 Kgs. Lyngby, Denmark. Electronic address: thomas.m.fenton@gmail.com.
Peter B JørgensenMucosal Immunology Group, Department of Health Technology, Technical University of Denmark, Kemitorvet, 2800 Kgs. Lyngby, Denmark.
Kristoffer NissTranslational Disease Systems Biology, University of Copenhagen, 2200 Copenhagen, Denmark.
Samuel J S RubinDepartment of Medicine, Division of Gastroenterology and Hepatology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Urs M MörbeImmunology Section, Lund University, BMC D14, 221-84 Lund, Sweden.
Lene B RiisDepartment of Pathology, Herlev Hospital, University of Copenhagen, 2730 Herlev, Denmark.
Clément Da SilvaImmunology Section, Lund University, BMC D14, 221-84 Lund, Sweden.
Adam PlumbImmunological Memory Group, Department of Health Technology, Technical University of Denmark, Kemitorvet, 2800 Kgs. Lyngby, Denmark.
Julien VandammeMucosal Immunology Group, Department of Health Technology, Technical University of Denmark, Kemitorvet, 2800 Kgs. Lyngby, Denmark.
Henrik L JakobsenDepartment of Gastroenterology, Surgical Section, Herlev Hospital, University of Copenhagen, 2730 Herlev, Denmark.
Søren BrunakTranslational Disease Systems Biology, University of Copenhagen, 2200 Copenhagen, Denmark.
Aida HabtezionDepartment of Medicine, Division of Gastroenterology and Hepatology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Ole H NielsenDepartment of Gastroenterology, Medical Section, Herlev Hospital, University of Copenhagen, 2730 Herlev, Denmark.
Bengt Johansson-LindbomImmunology Section, Lund University, BMC D14, 221-84 Lund, Sweden; Immunological Memory Group, Department of Health Technology, Technical University of Denmark, Kemitorvet, 2800 Kgs. Lyngby, Denmark.
William W AgaceMucosal Immunology Group, Department of Health Technology, Technical University of Denmark, Kemitorvet, 2800 Kgs. Lyngby, Denmark; Immunology Section, Lund University, BMC D14, 221-84 Lund, Sweden. Electronic address: wiag@dtu.dk.
Technical University of Denmark · DKUniversity of Copenhagen · DKLund University · SEStanford University · US

Funding

Stanford Islet Research CoreP30DK116074 · NIDDK · STANFORD UNIVERSITY · PI Seung K Kim · 2017 to 2026
$19.5M
Role and Regulation of colon Trafficking Novel G-Protein Coupled ReceptorsR01DK101119 · NIDDK · STANFORD UNIVERSITY · PI HABTEZION, AIDA · 2016 to 2019
$2.0M
BD Canto II RUO CytometerS10RR027431 · NCRR · STANFORD UNIVERSITY · PI NOLAN, GARRY P · 2010 to 2010
$236k
NCRR NIH HHS S10 RR027431NIDDK NIH HHS P30 DK116074NIDDK NIH HHS R01 DK101119
6 · The paper itself

Abstract

The intestine contains some of the most diverse and complex immune compartments in the body. Here we describe a method for isolating human gut-associated lymphoid tissues (GALTs) that allows unprecedented profiling of the adaptive immune system in submucosal and mucosal isolated lymphoid follicles (SM-ILFs and M-ILFs, respectively) as well as in GALT-free intestinal lamina propria (LP). SM-ILF and M-ILF showed distinct patterns of distribution along the length of the intestine, were linked to the systemic circulation through MAdCAM-1

Indexed as

Adaptive ImmunityAnimalsFlow CytometryGastric MucosaHumansImmunity, MucosalImmunoglobulin AImmunoglobulin MIntestinal MucosaIntestinesLymphocytesLymphoid TissueMicroscopy, ConfocalMicroscopy, Electron, ScanningPeyer's PatchesSequence Analysis, DNAImmunoglobulin AImmunoglobulin Mcolonhuman intestinal regional mucosal folliclesIgAiIeumILFPP

Identifiers

PMID32160523
PMCPMC7155934
OpenAlexW3012465309

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.