Evidence map›Paper›PMID 32160292›Full record

ArticleBlood2020

Coding and noncoding drivers of mantle cell lymphoma identified through exome and genome sequencing.

Prasath Pararajalingam, Krysta M Coyle, Sarah E Arthur, Nicole Thomas, Miguel Alcaide, Barbara Meissner, Merrill Boyle, Quratulain Qureshi, Bruno M Grande, Christopher Rushton and 16 more

Open access · greenAbstract read
In one paragraph

Article in Blood, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

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  14. Journal of clinical medicine · 2025
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  20. HNRNPH1-mediated splicing events regulatebioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 7 institutions in 4 countries.

Prasath PararajalingamDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Krysta M CoyleDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Sarah E ArthurDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Nicole ThomasDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Miguel AlcaideDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Barbara MeissnerBC Cancer Centre for Lymphoid Cancer and.
Merrill BoyleBC Cancer Centre for Lymphoid Cancer and.
Quratulain QureshiDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Bruno M GrandeDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Christopher RushtonDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Graham W SlackBC Cancer Centre for Lymphoid Cancer and.
Andrew J MungallMichael Smith Genome Sciences Centre, Vancouver, BC, Canada.
Constantine S TamPeter MacCallum Cancer Centre, Melbourne, VIC, Australia.
Rishu AgarwalPeter MacCallum Cancer Centre, Melbourne, VIC, Australia.
Sarah-Jane DawsonPeter MacCallum Cancer Centre, Melbourne, VIC, Australia.
Georg LenzDepartment of Medicine A, Hematology, Oncology, and Pneumology, University Hospital Münster, Münster, Germany.
Sriram BalasubramanianJanssen Research and Development, San Diego, CA; and.
Randy D GascoyneBC Cancer Centre for Lymphoid Cancer and.
Christian SteidlBC Cancer Centre for Lymphoid Cancer and.
Joseph ConnorsBC Cancer Centre for Lymphoid Cancer and.
Diego VillaBC Cancer Centre for Lymphoid Cancer and.
Timothy E AudasDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Marco A MarraBC Cancer Centre for Lymphoid Cancer and.
Nathalie A JohnsonDepartment of Medicine, Jewish General Hospital, Montreal, QC, Canada.
David W ScottBC Cancer Centre for Lymphoid Cancer and.
Ryan D MorinDepartment of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, BC, Canada.
Simon Fraser University · CAThe University of Melbourne · AUCanada's Michael Smith Genome Sciences Centre · CAJanssen (United States) · USJewish General Hospital · CAPeter MacCallum Cancer Centre · AUUniversity Hospital Münster · DE

Funding

CIHR 300738
6 · The paper itself

Abstract

Mantle cell lymphoma (MCL) is an uncommon B-cell non-Hodgkin lymphoma (NHL) that is incurable with standard therapies. The genetic drivers of this cancer have not been firmly established, and the features that contribute to differences in clinical course remain limited. To extend our understanding of the biological pathways involved in this malignancy, we performed a large-scale genomic analysis of MCL using data from 51 exomes and 34 genomes alongside previously published exome cohorts. To confirm our findings, we resequenced the genes identified in the exome cohort in 191 MCL tumors, each having clinical follow-up data. We confirmed the prognostic association of TP53 and NOTCH1 mutations. Our sequencing revealed novel recurrent noncoding mutations surrounding a single exon of the HNRNPH1gene. In RNA-seq data from 103 of these cases, MCL tumors with these mutations had a distinct imbalance of HNRNPH1 isoforms. This altered splicing of HNRNPH1 was associated with inferior outcomes in MCL and showed a significant increase in protein expression by immunohistochemistry. We describe a functional role for these recurrent noncoding mutations in disrupting an autoregulatory feedback mechanism, thereby deregulating HNRNPH1 protein expression. Taken together, these data strongly imply a role for aberrant regulation of messenger RNA processing in MCL pathobiology.

Indexed as

AdultAgedAged, 80 and overFemaleGenetic Predisposition to DiseaseGenotypeHeterogeneous-Nuclear RibonucleoproteinsHumansLymphoma, Mantle-CellMaleMiddle AgedMutationWhole Genome SequencingHeterogeneous-Nuclear Ribonucleoproteins

Identifiers

PMID32160292
PMCPMC7440974
OpenAlexW3011866243

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.