Evidence map›Paper›PMID 32160276›Full record

ArticleHuman molecular genetics2020

DHTKD1 and OGDH display substrate overlap in cultured cells and form a hybrid 2-oxo acid dehydrogenase complex in vivo.

João Leandro, Tetyana Dodatko, Jan Aten, Natalia S Nemeria, Xu Zhang, Frank Jordan, Ronald C Hendrickson, Roberto Sanchez, Chunli Yu, Robert J DeVita and 1 more

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. HeterozygousGenes · 2021
    Article
  16. Observational
  17. Review
  18. Knock-Out ofFrontiers in endocrinology · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

João LeandroDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Tetyana DodatkoDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Jan AtenDepartment of Pathology, Amsterdam University Medical Centers, University of Amsterdam, Amsterdam, 1105 AZ The Netherlands.
Natalia S NemeriaDepartment of Chemistry, Rutgers, The State University of New Jersey, Newark, NJ 07102, USA.
Xu ZhangDepartment of Chemistry, Rutgers, The State University of New Jersey, Newark, NJ 07102, USA.
Frank JordanDepartment of Chemistry, Rutgers, The State University of New Jersey, Newark, NJ 07102, USA.
Ronald C HendricksonMicrochemistry and Proteomics Core, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.
Roberto SanchezDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Chunli YuDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Robert J DeVitaDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Sander M HoutenDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Icahn School of Medicine at Mount Sinai · USRutgers, The State University of New Jersey · USDiscovery Institute · USComplete Genomics (United States) · USMemorial Sloan Kettering Cancer Center · USUniversity of Amsterdam · NL

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
MSHS Translational Science HubUL1TR001433 · NCATS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI WRIGHT, ROSALIND J · 2015 to 2019
$26.6M
Novel Treatment Options for Glutaric AciduriaR21HD088775 · NICHD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DEVITA, ROBERT J, HOUTEN, SANDER MICHEL · 2017 to 2018
$466k
Mechanistic Issues Related to Aging on Human 2-Oxoglutarate Dehydrogenase ComplexR15GM116077 · NIGMS · RUTGERS THE STATE UNIV OF NJ NEWARK · PI JORDAN, FRANK · 2015 to 2015
$369k
Genetic validation of DHTKD1 as a therapeutic target for the treatment of Glutaric Aciduria type 1R03HD092878 · NICHD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HOUTEN, SANDER MICHEL · 2017 to 2018
$170k
NCATS NIH HHS UL1 TR001433NCI NIH HHS P30 CA008748NICHD NIH HHS R03 HD092878NICHD NIH HHS R21 HD088775NIGMS NIH HHS R15 GM116077
6 · The paper itself

Abstract

Glutaric aciduria type 1 (GA1) is an inborn error of lysine degradation characterized by a specific encephalopathy that is caused by toxic accumulation of lysine degradation intermediates. Substrate reduction through inhibition of DHTKD1, an enzyme upstream of the defective glutaryl-CoA dehydrogenase, has been investigated as a potential therapy, but revealed the existence of an alternative enzymatic source of glutaryl-CoA. Here, we show that loss of DHTKD1 in glutaryl-CoA dehydrogenase-deficient HEK-293 cells leads to a 2-fold decrease in the established GA1 clinical biomarker glutarylcarnitine and demonstrate that oxoglutarate dehydrogenase (OGDH) is responsible for this remaining glutarylcarnitine production. We furthermore show that DHTKD1 interacts with OGDH, dihydrolipoyl succinyltransferase and dihydrolipoamide dehydrogenase to form a hybrid 2-oxoglutaric and 2-oxoadipic acid dehydrogenase complex. In summary, 2-oxoadipic acid is a substrate for DHTKD1, but also for OGDH in a cell model system. The classical 2-oxoglutaric dehydrogenase complex can exist as a previously undiscovered hybrid containing DHTKD1 displaying improved kinetics towards 2-oxoadipic acid.

Indexed as

Acyl Coenzyme AAmino Acid Metabolism, Inborn ErrorsBrain Diseases, MetabolicCells, CulturedGlutaryl-CoA DehydrogenaseHEK293 CellsHumansKetoglutarate Dehydrogenase ComplexKetone OxidoreductasesSubstrate SpecificityAcyl Coenzyme ADHTKD1 protein, humanGlutaryl-CoA Dehydrogenaseglutaryl-coenzyme AKetoglutarate Dehydrogenase ComplexKetone OxidoreductasesOGDHL protein, human

Identifiers

PMID32160276
PMCPMC7206849
OpenAlexW3011962946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.