Evidence map›Paper›PMID 32159764›Full record

ArticleDatabase : the journal of biological databases and curation2020

MMHub, a database for the mulberry metabolome.

Dong Li, Bi Ma, Xiaofei Xu, Guo Chen, Tian Li, Ningjia He

Abstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dong LiState Key Laboratory of Silkworm Genome Biology, Southwest University, No. 2, Tiansheng Road, Beibei, Chongqing 400715, China.
Bi MaState Key Laboratory of Silkworm Genome Biology, Southwest University, No. 2, Tiansheng Road, Beibei, Chongqing 400715, China.
Xiaofei XuCollege of Computer and Information Science, Southwest University, No. 2, Tiansheng Road, Beibei, Chongqing 400715, China.
Guo ChenState Key Laboratory of Silkworm Genome Biology, Southwest University, No. 2, Tiansheng Road, Beibei, Chongqing 400715, China.
Tian LiState Key Laboratory of Silkworm Genome Biology, Southwest University, No. 2, Tiansheng Road, Beibei, Chongqing 400715, China.
Ningjia HeState Key Laboratory of Silkworm Genome Biology, Southwest University, No. 2, Tiansheng Road, Beibei, Chongqing 400715, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mulberry is an important economic crop plant and traditional medicine. It contains a huge array of bioactive metabolites such as flavonoids, amino acids, alkaloids and vitamins. Consequently, mulberry has received increasing attention in recent years. MMHub (version 1.0) is the first open public repository of mass spectra of small chemical compounds (<1000 Da) in mulberry leaves. The database contains 936 electrospray ionization tandem mass spectrometry (ESI-MS2) data and lists the specific distribution of compounds in 91 mulberry resources with two biological duplicates. ESI-MS2 data were obtained under non-standardized and independent experimental conditions. In total, 124 metabolites were identified or tentatively annotated and details of 90 metabolites with associated chemical structures have been deposited in the database. Supporting information such as PubChem compound information, molecular formula and metabolite classification are also provided in the MS2 spectral tag library. The MMHub provides important and comprehensive metabolome data for scientists working with mulberry. This information will be useful for the screening of quality resources and specific metabolites of mulberry. Database URL: https://biodb.swu.edu.cn/mmdb/.

Indexed as

Databases, FactualMetabolomeChromatography, High Pressure LiquidData CurationData MiningFruitInternetMetabolomicsMorusTandem Mass Spectrometry

Identifiers

PMID32159764
PMCPMC7065671

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.