Evidence map›Paper›PMID 32157145›Full record

ArticleScientific reports2020

Laser microdissection-based microproteomics of the hippocampus of a rat epilepsy model reveals regional differences in protein abundances.

Amanda M do Canto, André S Vieira, Alexandre H B Matos, Benilton S Carvalho, Barbara Henning, Braxton A Norwood, Sebastian Bauer, Felix Rosenow, Rovilson Gilioli, Fernando Cendes and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Benchmarking the proteomic profile of animal models of mesial temporal epilepsy.Annals of clinical and translational neurology · 2022
    Article
  9. Neuroproteomics in Epilepsy: What Do We Know so Far?Frontiers in molecular neuroscience · 2020
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Amanda M do CantoDepartment of Medical Genetics and Genomic Medicine, School of Medical Sciences, University of Campinas (UNICAMP), Campinas, Brazil.ORCID 0000-0002-3989-8351
André S VieiraDepartment of Functional and Structural Biology, Biology Institute, University of Campinas (UNICAMP), Campinas, Brazil.ORCID 0000-0001-5318-8957
Alexandre H B MatosDepartment of Medical Genetics and Genomic Medicine, School of Medical Sciences, University of Campinas (UNICAMP), Campinas, Brazil.
Benilton S CarvalhoDepartment of Statistics, Institute of Mathematics, Statistics and Scientific Computing, University of Campinas, (UNICAMP), Campinas, Brazil.
Barbara HenningDepartment of Medical Genetics and Genomic Medicine, School of Medical Sciences, University of Campinas (UNICAMP), Campinas, Brazil.ORCID 0000-0001-6881-9010
Braxton A NorwoodExpesicor Inc, Kalispell, MT, USA.
Sebastian BauerDepartment of Neurology, Epilepsy Centre Hessen, Philipps-University Marburg, Marburg, Germany.
Felix RosenowDepartment of Neurology, Epilepsy Centre Hessen, Philipps-University Marburg, Marburg, Germany.
Rovilson GilioliLaboratory of Animal Quality Control, University of Campinas (UNICAMP), Campinas, Brazil.
Fernando CendesDepartment of Neurology, School of Medical Sciences, University of Campinas (UNICAMP), Campinas, Brazil.ORCID 0000-0001-9336-9568
Iscia Lopes-CendesDepartment of Medical Genetics and Genomic Medicine, School of Medical Sciences, University of Campinas (UNICAMP), Campinas, Brazil. icendes@unicamp.br.ORCID 0000-0002-6221-6822
Universidade Estadual de Campinas (UNICAMP) · BRGoethe University Frankfurt · DEPhilipps University of Marburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mesial temporal lobe epilepsy (MTLE) is a chronic neurological disorder affecting almost 40% of adult patients with epilepsy. Hippocampal sclerosis (HS) is a common histopathological abnormality found in patients with MTLE. HS is characterised by extensive neuronal loss in different hippocampus sub-regions. In this study, we used laser microdissection-based microproteomics to determine the protein abundances in different regions and layers of the hippocampus dentate gyrus (DG) in an electric stimulation rodent model which displays classical HS damage similar to that found in patients with MTLE. Our results indicate that there are differences in the proteomic profiles of different layers (granule cell and molecular), as well as different regions, of the DG (ventral and dorsal). We have identified new signalling pathways and proteins present in specific layers and regions of the DG, such as PARK7, RACK1, and connexin 31/gap junction. We also found two major signalling pathways that are common to all layers and regions: inflammation and energy metabolism. Finally, our results highlight the utility of high-throughput microproteomics and spatial-limited isolation of tissues in the study of complex disorders to fully appreciate the large biological heterogeneity present in different cell populations within the central nervous system.

Indexed as

AnimalsConnexinsDisease Models, AnimalEpilepsy, Temporal LobeGene Expression RegulationHippocampusHumansLaser Capture MicrodissectionOrgan SpecificityProtein Deglycase DJ-1Protein Interaction MapsProteomicsRatsReceptors for Activated C KinaseSignal TransductionConnexinsGJB3 protein, humanPARK7 protein, ratProtein Deglycase DJ-1RACK1 protein, ratReceptors for Activated C Kinase

Identifiers

PMID32157145
PMCPMC7064578
OpenAlexW3012164612

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.