Evidence map›Paper›PMID 32156071›Full record

ArticleMicroorganisms2020

Gut Microbial Protein Expression in Response to Dietary Patterns in a Controlled Feeding Study: A Metaproteomic Approach.

Sheng Pan, Meredith A J Hullar, Lisa A Lai, Hong Peng, Damon H May, William S Noble, Daniel Raftery, Sandi L Navarro, Marian L Neuhouser, Paul D Lampe and 2 more

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. SEMQuant: Extending Sipros-Ensemble with Match-Between-Runs for Comprehensive Quantitative Metaproteomics.Bioinformatics research and applications : ... international symposium, ISBRA ... proceedings. ISBRA (Conference) · 2024
    Article
  7. Article
  8. Gut Microbiome Proteomics in Food Allergies.International journal of molecular sciences · 2023
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Sheng PanInstitute of Molecular Medicine, the University of Texas Health Science Center at Houston, Houston, TX 77030, USA.
Meredith A J HullarFred Hutchinson Cancer Research Center, Division of Public Health Sciences, Seattle, WA 98109, USA.
Lisa A LaiDepartment of Medicine, University of Washington, Seattle, WA 98105, USA.
Hong PengInstitute of Molecular Medicine, the University of Texas Health Science Center at Houston, Houston, TX 77030, USA.
Damon H MayDepartment of Genome Sciences, University of Washington, Seattle, WA 98105, USA.ORCID 0000-0001-6902-3153
William S NobleDepartment of Genome Sciences, University of Washington, Seattle, WA 98105, USA.
Daniel RafteryFred Hutchinson Cancer Research Center, Division of Public Health Sciences, Seattle, WA 98109, USA.ORCID 0000-0003-2467-8118
Sandi L NavarroFred Hutchinson Cancer Research Center, Division of Public Health Sciences, Seattle, WA 98109, USA.ORCID 0000-0002-4260-2486
Marian L NeuhouserFred Hutchinson Cancer Research Center, Division of Public Health Sciences, Seattle, WA 98109, USA.
Paul D LampeFred Hutchinson Cancer Research Center, Division of Public Health Sciences, Seattle, WA 98109, USA.ORCID 0000-0002-1399-2761
Johanna W LampeFred Hutchinson Cancer Research Center, Division of Public Health Sciences, Seattle, WA 98109, USA.ORCID 0000-0003-2717-3780
Ru ChenDivision of Gastroenterology and Hepatology, Department of Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Fred Hutch Cancer Center · USUniversity of Washington · USThe University of Texas Health Science Center at Houston · USBaylor College of Medicine · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
Preventing obesity in low income working adultsU54CA116847 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI MCTIERNAN, ANNE M. · 2005 to 2010
$12.6M
Human and Bacterial Molecular Pathways in Cancer Risk: Modulation by DietR01CA192222 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI LAMPE, JOHANNA W · 2016 to 2019
$2.9M
Biomarkers for Early Detection of Colorectal Cancer in Ulcerative ColitisR01CA211892 · NCI · UNIVERSITY OF WASHINGTON · PI CHEN, RU · 2017 to 2022
$2.3M
NCI NIH HHS P30 CA015704NCI NIH HHS R01 CA192222NCI NIH HHS R01 CA211892NIH HHS P30 CA015704NIH HHS R01 CA192222NIH HHS R01 CA211892NIH HHS U54 CA116847
6 · The paper itself

Abstract

Although the gut microbiome has been associated with dietary patterns linked to health, microbial metabolism is not well characterized. This ancillary study was a proof of principle analysis for a novel application of metaproteomics to study microbial protein expression in a controlled dietary intervention. We measured the response of the microbiome to diet in a randomized crossover dietary intervention of a whole-grain, low glycemic load diet (WG) and a refined-grain, high glycemic load diet (RG). Total proteins in stools from 9 participants at the end of each diet period (

Indexed as

dietary interventiondysbiosisfatty acid metabolismMicrobiomemucin-degrading enzymesproteomicsSCFA

Identifiers

PMID32156071
PMCPMC7143255
OpenAlexW3010324150

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.