Evidence map›Paper›PMID 32155221›Full record

ArticlePloS one2020

Functional analysis of proposed substrate-binding residues of Hsp104.

Matthew K Howard, Brian S Sohn, Julius von Borcke, Andy Xu, Meredith E Jackrel

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Drivers of Hsp104 potentiation revealed by scanning mutagenesis of the middle domain.Protein science : a publication of the Protein Society · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Matthew K HowardDepartment of Chemistry, Washington University, St. Louis, Missouri, United States of America.
Brian S SohnDepartment of Chemistry, Washington University, St. Louis, Missouri, United States of America.
Julius von BorckeDepartment of Chemistry, Washington University, St. Louis, Missouri, United States of America.
Andy XuDepartment of Chemistry, Washington University, St. Louis, Missouri, United States of America.
Meredith E JackrelDepartment of Chemistry, Washington University, St. Louis, Missouri, United States of America.ORCID 0000-0003-4406-9504

Funding

Safeguards of the Proteome: Elucidating the Roles of Protein DisaggregasesR35GM128772 · NIGMS · WASHINGTON UNIVERSITY · PI JACKREL, MEREDITH E. · 2018 to 2022
$2.0M
NIGMS NIH HHS R35 GM128772
6 · The paper itself

Abstract

Hsp104 is a hexameric AAA+ yeast disaggregase capable of solubilizing disordered aggregates and amyloid. Hsp104 couples ATP hydrolysis to polypeptide translocation through its central channel. Substrate binding by Hsp104 is mediated primarily by two conserved tyrosine residues in nucleotide binding domain (NBD) 1 and NBD2. Recent structural studies have revealed that an additional tyrosine residue (Y650) located in NBD2 appears to contact substrate and may play an important role in Hsp104 function. Here, we functionally analyze the properties of this proposed Hsp104 -substrate interaction. We find that Y650 is not essential for Hsp104 to confer thermotolerance. Supporting these findings, in a potentiated Hsp104 variant background, the Y650A mutation does not abolish potentiation. However, modulation of this site does have subtle effects on the activity of this potentiated Hsp104 variant. We therefore suggest that while Y650 is not essential for Hsp104 function, its modulation may be useful for fine-tuning Hsp104 properties.

Indexed as

Adenosine TriphosphateCryoelectron MicroscopyHeat-Shock ProteinsHSP70 Heat-Shock ProteinsModels, MolecularProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStructure-Activity RelationshipAdenosine TriphosphateHeat-Shock ProteinsHsP104 protein, S cerevisiaeHSP70 Heat-Shock ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID32155221
PMCPMC7064214

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.