Evidence map›Paper›PMID 32155011›Full record

ArticleJBRA assisted reproduction2020

First custom next-generation sequencing infertility panel in Latin America: design and first results.

Daniela Lorenzi, Cecilia Fernández, Melina Bilinski, Mónica Fabbro, Micaela Galain, Sebastián Menazzi, Mariana Miguens, Pamela Nicotra Perassi, María Florencia Fulco, Susana Kopelman and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in JBRA assisted reproduction, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Next-Generation Sequencing Infertility Panel in Turkey: First Results.Balkan journal of medical genetics : BJMG · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Daniela LorenziNovagen. Buenos Aires, Argentina.
Cecilia FernándezNovagen. Buenos Aires, Argentina.
Melina BilinskiNovagen. Buenos Aires, Argentina.
Mónica FabbroNovagen. Buenos Aires, Argentina.
Micaela GalainNovagen. Buenos Aires, Argentina.
Sebastián MenazziNovagen. Buenos Aires, Argentina.
Mariana MiguensCentro de Estudios en Genética y Reproducción (CEGYR). Buenos Aires, Argentina.
Pamela Nicotra PerassiNovagen. Buenos Aires, Argentina.
María Florencia FulcoCentro de Estudios en Genética y Reproducción (CEGYR). Buenos Aires, Argentina.
Susana KopelmanCentro de Estudios en Genética y Reproducción (CEGYR). Buenos Aires, Argentina.
Gabriel FiszbajnNovagen. Buenos Aires, Argentina.
Florencia NodarNovagen. Buenos Aires, Argentina.
Sergio PapierNovagen. Buenos Aires, Argentina.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo present the development of the first custom gene panel for the diagnosis of male and female infertility in Latin America.

methodsWe developed a next-generation sequencing (NGS) panel that assesses genes associated with infertility. The panel targeted exons and their flanking regions. Selected introns in the CFTR gene were also included. The FMR1 gene and Y chromosome microdeletions were analyzed with other recommended methodologies. An in-house developed bioinformatic pipeline was applied for the interpretation of the results. Clear infertility phenotypes, idiopathic infertility, and samples with known pathogenic variants were evaluated.

resultsA total of 75 genes were selected based on female (primary ovarian insufficiency, risk of ovarian hyperstimulation syndrome, recurrent pregnancy loss, oocyte maturation defects, and embryo development arrest) and male conditions (azoospermia, severe oligospermia, asthenozoospermia, and teratozoospermia). The panel designed was used to assess 25 DNA samples. Two of the variants found were classified as pathogenic and enable the diagnosis of a woman with secondary amenorrhea and a man with oligoasthenoteratozoospermia. Targeted NGS assay metrics resulted in a mean of 180X coverage, with more than 98% of the bases covered ≥20X.

conclusionOur custom gene sequencing panel designed for the diagnosis of male and female infertility caused by genetic defects revealed the underlying genetic cause of some cases of infertility. The panel will allow us to develop more precise approaches in assisted reproduction.

Indexed as

High-Throughput Nucleotide SequencingInfertilityFemaleGenetic TestingHumansLatin AmericaMaleMutationPolymorphism, Single NucleotideSequence Analysis, DNAgene panelgenetic variantinfertilitynext-generation sequencing

Identifiers

PMID32155011
PMCPMC7169920
OpenAlexW3012301059

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.