Evidence map›Paper›PMID 32154941›Full record

ArticleThe EMBO journal2020

HNF1A recruits KDM6A to activate differentiated acinar cell programs that suppress pancreatic cancer.

Mark Kalisz, Edgar Bernardo, Anthony Beucher, Miguel Angel Maestro, Natalia Del Pozo, Irene Millán, Lena Haeberle, Martin Schlensog, Sami Alexander Safi, Wolfram Trudo Knoefel and 9 more

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 77 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 4 countries.

Mark KaliszSection of Epigenomics and Disease, Department of Medicine, Imperial College London, London, UK.ORCID 0000-0002-8770-2798
Edgar BernardoBioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Anthony BeucherSection of Epigenomics and Disease, Department of Medicine, Imperial College London, London, UK.
Miguel Angel MaestroBioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Natalia Del PozoEpithelial Carcinogenesis Group, Spanish National Cancer Research Centre-CNIO, Madrid, Spain.
Irene MillánEpithelial Carcinogenesis Group, Spanish National Cancer Research Centre-CNIO, Madrid, Spain.
Lena HaeberleInstitute of Pathology, Heinrich-Heine University and University Hospital of Düsseldorf, Düsseldorf, Germany.ORCID 0000-0002-8793-568X
Martin SchlensogInstitute of Pathology, Heinrich-Heine University and University Hospital of Düsseldorf, Düsseldorf, Germany.
Sami Alexander SafiDepartment of Surgery, Heinrich-Heine University and University Hospital of Düsseldorf, Düsseldorf, Germany.
Wolfram Trudo KnoefelDepartment of Surgery, Heinrich-Heine University and University Hospital of Düsseldorf, Düsseldorf, Germany.
Vanessa GrauBioinformatics and Genomics Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Matías de VasSection of Epigenomics and Disease, Department of Medicine, Imperial College London, London, UK.
Karl B ShpargelDepartment of Genetics and Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Eva VaqueroCiberEHD, Institut de Malalties Digestives i Metabòliques, Hospital Clínic, IDIBAPS, Barcelona, Spain.
Terry MagnusonDepartment of Genetics and Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Sagrario OrtegaTransgenics Unit, Spanish National Cancer Research Centre-CNIO, Madrid, Spain.
Irene EspositoDepartment of Surgery, Heinrich-Heine University and University Hospital of Düsseldorf, Düsseldorf, Germany.
Francisco X RealEpithelial Carcinogenesis Group, Spanish National Cancer Research Centre-CNIO, Madrid, Spain.
Jorge FerrerSection of Epigenomics and Disease, Department of Medicine, Imperial College London, London, UK.ORCID 0000-0002-5959-5729
Düsseldorf University Hospital · DECentro de Investigación Biomédica en Red Diabetes y Enfermedades Metabólicas Asociadas · ESSpanish National Cancer Research Centre · ESImperial College London · GBUniversity of North Carolina at Chapel Hill · USHospital Clínic de Barcelona · ESUniversitat Pompeu Fabra · ES

Funding

Albino Deletion Complex and Early Mouse DevelopmentR01GM101974 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MAGNUSON, TERRY R · 2012 to 2024
$5.2M
Medical Research Council MR/L02036X/1NIGMS NIH HHS R01 GM101974Wellcome Trust
6 · The paper itself

Abstract

Defects in transcriptional regulators of pancreatic exocrine differentiation have been implicated in pancreatic tumorigenesis, but the molecular mechanisms are poorly understood. The locus encoding the transcription factor HNF1A harbors susceptibility variants for pancreatic ductal adenocarcinoma (PDAC), while KDM6A, encoding Lysine-specific demethylase 6A, carries somatic mutations in PDAC. Here, we show that pancreas-specific Hnf1a null mutant transcriptomes phenocopy those of Kdm6a mutations, and both defects synergize with Kras

Indexed as

Acinar CellsAnimalsCarcinoma, Pancreatic DuctalEpigenesis, GeneticGene Expression Regulation, NeoplasticGene Regulatory NetworksHepatocyte Nuclear Factor 1-alphaHistone DemethylasesHumansMiceMutationOrgan SpecificityPancreasPancreatic NeoplasmsHepatocyte Nuclear Factor 1-alphaHistone DemethylasesHNF1A protein, humanKDM6A protein, humanHNF1AKDM6Anon-classical PDACpancreaspancreas differentiation

Identifiers

PMID32154941
PMCPMC7196917
OpenAlexW3010741834

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.