Evidence map›Paper›PMID 32153140›Full record

ArticleAnnals of clinical and translational neurology2020

Targeted gene panel use in 2249 neuromuscular patients: the Australasian referral center experience.

Sarah J Beecroft, Kyle S Yau, Richard J N Allcock, Kym Mina, Rebecca Gooding, Fathimath Faiz, Vanessa J Atkinson, Cheryl Wise, Padma Sivadorai, Daniel Trajanoski and 10 more

Abstract read
In one paragraph

Article in Annals of clinical and translational neurology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Autosomal Recessive Spastic Ataxia of Charlevoix-Saguenay in Two Half-Siblings.Annals of clinical and translational neurology · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Loss-of-function variants inJournal of medical genetics · 2024
    Article
  9. Article
  10. Two Novel Variants inNeurology. Genetics · 2024
    Article
  11. Article
  12. Article
  13. Utility of exome sequencing for the diagnosis of pediatric-onset neuromuscular diseases beyond diagnostic yield: a narrative review.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2024
    Review
  14. Brain communications · 2023
    Article
  15. Article
  16. Article
  17. Novel Variants ofFrontiers in neurology · 2022
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Sarah J Beecroft *Centre for Medical Research, University of Western Australia, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia.ORCID 0000-0002-3935-2279
Kyle S Yau *Centre for Medical Research, University of Western Australia, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia.
Richard J N AllcockSchool of Biomedical Sciences, University of Western Australia, Perth, Western Australia, Australia.
Kym MinaDepartment of Diagnostic Genomics, Department of Health, PathWest Laboratory Medicine, QEII Medical Centre, Nedlands, Western Australia, Australia.
Rebecca GoodingDepartment of Diagnostic Genomics, Department of Health, PathWest Laboratory Medicine, QEII Medical Centre, Nedlands, Western Australia, Australia.
Fathimath FaizDepartment of Diagnostic Genomics, Department of Health, PathWest Laboratory Medicine, QEII Medical Centre, Nedlands, Western Australia, Australia.
Vanessa J AtkinsonSchool of Biomedical Sciences, University of Western Australia, Perth, Western Australia, Australia.
Cheryl WiseDepartment of Diagnostic Genomics, Department of Health, PathWest Laboratory Medicine, QEII Medical Centre, Nedlands, Western Australia, Australia.
Padma SivadoraiDepartment of Diagnostic Genomics, Department of Health, PathWest Laboratory Medicine, QEII Medical Centre, Nedlands, Western Australia, Australia.
Daniel TrajanoskiDepartment of Diagnostic Genomics, Department of Health, PathWest Laboratory Medicine, QEII Medical Centre, Nedlands, Western Australia, Australia.
Nina KresojeSchool of Biomedical Sciences, University of Western Australia, Perth, Western Australia, Australia.
Royston OngCentre for Medical Research, University of Western Australia, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia.
Rachael M DuffCentre for Medical Research, University of Western Australia, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia.
Macarena Cabrera-SerranoDepartment of Neurology, Hospital Universitario Virgen del Rocio, Instituto de Biomedicina de Sevilla, CSIC, Universidad de Sevilla, Sevilla, Spain.
Kristen J NowakCentre for Medical Research, University of Western Australia, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia.
Nicholas PachterGenetic Services of Western Australia, Department of Health, Government of Western Australia, Perth, Western Australia, Australia.
Gianina RavenscroftCentre for Medical Research, University of Western Australia, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia.
Phillipa J LamontNeurogenetic Unit, Royal Perth Hospital, Perth, Western Australia, Australia.
Mark R Davis *Department of Diagnostic Genomics, Department of Health, PathWest Laboratory Medicine, QEII Medical Centre, Nedlands, Western Australia, Australia.
Nigel G Laing *Centre for Medical Research, University of Western Australia, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo develop, test, and iterate a comprehensive neuromuscular targeted gene panel in a national referral center.

methodsWe designed two iterations of a comprehensive targeted gene panel for neuromuscular disorders. Version 1 included 336 genes, which was increased to 464 genes in Version 2. Both panels used TargetSeq

resultsSix hundred and sixty-five patients received a genetic diagnosis (30%). Diagnosed patients were significantly younger that undiagnosed patients (26.4 and 32.5 years, respectively; P = 4.6326E-9). The diagnostic success varied markedly between disease categories. Pathogenic variants in 10 genes explained 38% of the disease burden. Unexpected phenotypic expansions were discovered in multiple cases. Triage of unsolved cases for research exome testing led to the discovery of six new disease genes.

interpretationA comprehensive targeted diagnostic panel was an effective method for neuromuscular disease diagnosis within the context of an Australasian referral center. Use of smaller disease-specific panels would have precluded diagnosis in many patients and increased cost. Analysis through a centralized laboratory facilitated detection of recurrent, but under-recognized pathogenic variants.

Indexed as

AdolescentAdultAgedAged, 80 and overAustraliaChildChild, PreschoolCohort StudiesFemaleGenetic TestingHigh-Throughput Nucleotide SequencingHumansInfantMaleMiddle AgedNeuromuscular Diseases

Identifiers

PMID32153140
PMCPMC7086001

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.