Evidence map›Paper›PMID 32152546›Full record

ArticleNature chemical biology2020

A widespread role for SLC transmembrane transporters in resistance to cytotoxic drugs.

Enrico Girardi, Adrián César-Razquin, Sabrina Lindinger, Konstantinos Papakostas, Justyna Konecka, Jennifer Hemmerich, Stefanie Kickinger, Felix Kartnig, Bettina Gürtl, Kristaps Klavins and 9 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 141 citations in OpenAlex.

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22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 2 countries.

Enrico GirardiCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.ORCID http://orcid.org/0000-0003-3508-2723
Adrián César-RazquinCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Sabrina LindingerCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Konstantinos PapakostasCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Justyna KoneckaCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Jennifer HemmerichDepartment of Pharmaceutical Chemistry, University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0003-0372-8956
Stefanie KickingerDepartment of Pharmaceutical Chemistry, University of Vienna, Vienna, Austria.
Felix KartnigCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Bettina GürtlCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Kristaps KlavinsCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Vitaly SedlyarovCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.ORCID http://orcid.org/0000-0002-9872-3535
Alvaro Ingles-PrietoCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Giuseppe FiumeCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Anna KorenCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.ORCID http://orcid.org/0000-0003-2528-4970
Charles-Hugues LardeauCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Richard Kumaran KandasamyCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.
Stefan KubicekCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria.ORCID http://orcid.org/0000-0003-0855-8343
Gerhard F EckerDepartment of Pharmaceutical Chemistry, University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0003-4209-6883
Giulio Superti-FurgaCeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria. gsuperti@cemm.oeaw.ac.at.ORCID http://orcid.org/0000-0002-0570-1768
Austrian Academy of Sciences · ATUniversity of Vienna · ATCeMM Research Center for Molecular Medicine · AT

Funding

Austrian Science Fund FWF I 2192Austrian Science Fund FWF P 29250Austrian Science Fund FWF W 1232European Research Council 695214European Research Council 772437
6 · The paper itself

Abstract

Solute carriers (SLCs) are the largest family of transmembrane transporters in humans and are major determinants of cellular metabolism. Several SLCs have been shown to be required for the uptake of chemical compounds into cellular systems, but systematic surveys of transporter-drug relationships in human cells are currently lacking. We performed a series of genetic screens in a haploid human cell line against 60 cytotoxic compounds representative of the chemical space populated by approved drugs. By using an SLC-focused CRISPR-Cas9 library, we identified transporters whose absence induced resistance to the drugs tested. This included dependencies involving the transporters SLC11A2/SLC16A1 for artemisinin derivatives and SLC35A2/SLC38A5 for cisplatin. The functional dependence on SLCs observed for a significant proportion of the screened compounds suggests a widespread role for SLCs in the uptake and cellular activity of cytotoxic drugs and provides an experimentally validated set of SLC-drug associations for a number of clinically relevant compounds.

Indexed as

Amino Acid Transport Systems, NeutralAntineoplastic AgentsBiochemical PhenomenaBiological TransportCation Transport ProteinsCRISPR-Cas SystemsDrug ResistanceGenetic TestingHumansMonocarboxylate Transport Protein 1Monocarboxylic Acid TransportersMonosaccharide Transport ProteinsProtein TransportSolute Carrier Family 11, Member 2Solute Carrier ProteinsSymportersAmino Acid Transport Systems, NeutralAntineoplastic AgentsCation Transport ProteinsMonocarboxylate Transport Protein 1Monocarboxylic Acid TransportersMonosaccharide Transport ProteinsSLC38A5 protein, humanSolute Carrier Family 11, Member 2Solute Carrier ProteinsSymportersUDP-Galactose Translocators

Identifiers

PMID32152546
PMCPMC7610918
OpenAlexW3010191570

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.