Evidence map›Paper›PMID 32152390›Full record

ArticleThe ISME journal2020

Oxygen isotope effects during microbial sulfate reduction: applications to sediment cell abundances.

E Bertran, A Waldeck, B A Wing, I Halevy, W D Leavitt, A S Bradley, D T Johnston

Abstract read
In one paragraph

Article in The ISME journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. The triple oxygen isotope composition of marine sulfate and 130 million years of microbial control.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Proteomic and Isotopic Response ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

E BertranDepartment of Earth and Planetary Sciences, Harvard University, Cambridge, MA, USA. ebertran@princeton.edu.
A WaldeckDepartment of Earth and Planetary Sciences, Harvard University, Cambridge, MA, USA.
B A WingDepartment of Geological Sciences, University of Colorado Boulder, Boulder, CO, USA.
I HalevyDepartment of Earth and Planetary Sciences, Weizmann Institute of Science, Rehovot, Israel.
W D LeavittDepartment of Earth Sciences, Dartmouth College, Hanover, NH, USA.
A S BradleyDepartment of Earth and Planetary Sciences, Washington University in St. Louis, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-4044-2802
D T JohnstonDepartment of Earth and Planetary Sciences, Harvard University, Cambridge, MA, USA. johnston@eps.harvard.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The majority of anaerobic biogeochemical cycling occurs within marine sediments. To understand these processes, quantifying the distribution of active cells and gross metabolic activity is essential. We present an isotope model rooted in thermodynamics to draw quantitative links between cell-specific sulfate reduction rates and active sedimentary cell abundances. This model is calibrated using data from a series of continuous culture experiments with two strains of sulfate reducing bacteria (freshwater bacterium Desulfovibrio vulgaris strain Hildenborough, and marine bacterium Desulfovibrio alaskensis strain G-20) grown on lactate across a range of metabolic rates and ambient sulfate concentrations. We use a combination of experimental sulfate oxygen isotope data and nonlinear regression fitting tools to solve for unknown kinetic, step-specific oxygen isotope effects. This approach enables identification of key isotopic reactions within the metabolic pathway, and defines a new, calibrated framework for understanding oxygen isotope variability in sulfate. This approach is then combined with porewater sulfate/sulfide concentration data and diagenetic modeling to reproduce measured

Indexed as

Oxygen IsotopesBacteriaDesulfovibrioOxidation-ReductionSulfatesSulfidesSulfur OxidesOxygen IsotopesSulfatesSulfidesSulfur Oxides

Identifiers

PMID32152390
PMCPMC7242377

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.