Evidence map›Paper›PMID 32151270›Full record

ArticleGenome biology2020

Hemispheric asymmetry in the human brain and in Parkinson's disease is linked to divergent epigenetic patterns in neurons.

Peipei Li, Elizabeth Ensink, Sean Lang, Lee Marshall, Meghan Schilthuis, Jared Lamp, Irving Vega, Viviane Labrie

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 75 citations in OpenAlex.

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  13. An Overview of Epigenetic Changes in the Parkinson's Disease Brain.International journal of molecular sciences · 2024
    Review
  14. Review
  15. Article
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  17. Artificial intelligence for dementia genetics and omics.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Peipei LiCenter for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503, USA.
Elizabeth EnsinkCenter for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503, USA.
Sean LangCenter for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503, USA.
Lee MarshallCenter for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503, USA.
Meghan SchilthuisCenter for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503, USA.
Jared LampDepartment of Translational Neuroscience, College of Human Medicine, Michigan State University, Grand Rapids, MI, 49503, USA.
Irving VegaDepartment of Translational Neuroscience, College of Human Medicine, Michigan State University, Grand Rapids, MI, 49503, USA.
Viviane LabrieCenter for Neurodegenerative Science, Van Andel Institute, Grand Rapids, MI, 49503, USA. viviane.labrie@vai.org.ORCID 0000-0003-1037-1967
Van Andel Institute · USSpectrum Health · USGrand Rapids Community College · US

Funding

Epigenetic contributions to symptom asymmetry in Parkinson's diseaseR01NS113894 · NINDS · VAN ANDEL RESEARCH INSTITUTE · PI COETZEE, GERHARD A · 2020 to 2024
$2.2M
Molecular signatures of Parkinsons disease in the gut and brainR21NS112614 · NINDS · VAN ANDEL RESEARCH INSTITUTE · PI BRUNDIN, PATRIK · 2019 to 2019
$523k
NIH HHS 1R21NS112614-01NINDS NIH HHS R01 NS113894NINDS NIH HHS R21 NS112614
6 · The paper itself

Abstract

backgroundHemispheric asymmetry in neuronal processes is a fundamental feature of the human brain and drives symptom lateralization in Parkinson's disease (PD), but its molecular determinants are unknown. Here, we identify divergent epigenetic patterns involved in hemispheric asymmetry by profiling DNA methylation in isolated prefrontal cortex neurons from control and PD brain hemispheres. DNA methylation is fine-mapped at enhancers and promoters, genome-wide, by targeted bisulfite sequencing in two independent sample cohorts.

resultsWe find that neurons of the human prefrontal cortex exhibit hemispheric differences in DNA methylation. Hemispheric asymmetry in neuronal DNA methylation patterns is largely mediated by differential CpH methylation, and chromatin conformation analysis finds that it targets thousands of genes. With aging, there is a loss of hemispheric asymmetry in neuronal epigenomes, such that hemispheres epigenetically converge in late life. In neurons of PD patients, hemispheric asymmetry in DNA methylation is greater than in controls and involves many PD risk genes. Epigenetic, transcriptomic, and proteomic differences between PD hemispheres correspond to the lateralization of PD symptoms, with abnormalities being most prevalent in the hemisphere matched to side of symptom predominance. Hemispheric asymmetry and symptom lateralization in PD is linked to genes affecting neurodevelopment, immune activation, and synaptic transmission. PD patients with a long disease course have greater hemispheric asymmetry in neuronal epigenomes than those with a short disease course.

conclusionsHemispheric differences in DNA methylation patterns are prevalent in neurons and may affect the progression and symptoms of PD.

Indexed as

Epigenesis, GeneticAgedAged, 80 and overAgingBrainDNA MethylationHumansMiddle AgedNeuronsParkinson DiseaseProteomicsTranscription, GeneticAgingEnhancerEpigeneticsHemisphere asymmetryNeuronsParkinson’s disease

Identifiers

PMID32151270
PMCPMC7063821
OpenAlexW3011103668

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.