Evidence map›Paper›PMID 32151242›Full record

ArticleBMC genomics2020

Trend analysis of the role of circular RNA in goat skeletal muscle development.

Yinghui Ling, Qi Zheng, Lu Zhu, Lina Xu, Menghua Sui, Yunhai Zhang, Ya Liu, Fugui Fang, Mingxing Chu, Yuehui Ma and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Yinghui LingCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China. lingyinghui@ahau.edu.cn.
Qi ZhengCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China.
Lu ZhuCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China.
Lina XuSchool of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, UK.
Menghua SuiCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China.
Yunhai ZhangCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China.
Ya LiuCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China.
Fugui FangCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China.
Mingxing ChuKey Laboratory of Farm Animal Genetic Resources and Germplasm Innovation of Ministry of Agriculture, Chinese academy of agricultural sciences, Beijing, China.
Yuehui MaKey Laboratory of Farm Animal Genetic Resources and Germplasm Innovation of Ministry of Agriculture, Chinese academy of agricultural sciences, Beijing, China.
Xiaorong ZhangCollege of Animal Science and Technology, Anhui Agricultural University, Hefei, China.
Anhui Agricultural University · CNChinese Academy of Agricultural Sciences · CNInstitute of Plant Protection · CN

Funding

Anhui Key Research and Development Program 1804a07020128National Natural Science Foundation of China 31772566Natural Science Foundation of Anhui Province 1708085MC61State Scholarship Fund of China Scholarship Council 201808340031
6 · The paper itself

Abstract

backgroundCircular RNA (circRNA) is produced during the splicing of mRNA (in addition to linear splicing) and is part of the gene regulatory network. The temporal expression patterns the different developmental stages were inseparable from these molecules' function.

resultsSkeletal muscles of Anhui white goat (AWG) across seven fetal to postnatal development stages were sequenced and 21 RNA sequencing libraries were constructed. We thereby identified 9090 circRNAs and analyzed their molecular properties, temporal expression patterns, and potential functions at the different stages. CircRNAs showed complexities and diversity of formation as the same host gene produces multiple isoforms of these nucleic acids with different expression profiles. The differential expression of 2881 circRNAs (DECs, P < 0.05) was identified and four were randomly selected and validated by qPCR. Moreover, 1118 DECs under strict selected (SDECs, |log2

conclusionOur current study provides a catalog of goat muscle-related circRNAs that can stratify skeletal muscle development fetus 45 days to newborn 90 days into three developmental stages. These findings better our understanding of functional transitions during mammalian muscle development.

Indexed as

AnimalsFetal DevelopmentGene Expression ProfilingGene Regulatory NetworksGoatsHigh-Throughput Nucleotide SequencingMuscle DevelopmentMuscle, SkeletalRNA, CircularSequence Analysis, RNARNA, CircularcircRNADevelopmentRNA-seqSkeletal muscle

Identifiers

PMID32151242
PMCPMC7063781
OpenAlexW3011299304

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.