Evidence map›Paper›PMID 32144741›Full record

ReviewBiophysical reviews2020

Recent progress of in-cell NMR of nucleic acids in living human cells.

Yudai Yamaoki, Takashi Nagata, Tomoki Sakamoto, Masato Katahira

Abstract readReview
In one paragraph

Review in Biophysical reviews, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Review
  3. Live Metabolomics with NMR.Analytical chemistry · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. In-Cell NMR Spectroscopy of Functional Riboswitch Aptamers in Eukaryotic Cells.Angewandte Chemie (International ed. in English) · 2021
    Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yudai YamaokiInstitute of Advanced Energy, Kyoto University, Uji, Kyoto, 611-0011, Japan.
Takashi NagataInstitute of Advanced Energy, Kyoto University, Uji, Kyoto, 611-0011, Japan.
Tomoki SakamotoGraduate School of Energy Science, Kyoto University, Uji, Kyoto, 611-0011, Japan.
Masato KatahiraInstitute of Advanced Energy, Kyoto University, Uji, Kyoto, 611-0011, Japan. katahira.masato.6u@kyoto-u.ac.jp.

Funding

Ministry of Education, Culture, Sports, Science and Technology 17K07307 and 17H05878Ministry of Education, Culture, Sports, Science and Technology 18H04550 and 18K19397Ministry of Education, Culture, Sports, Science and Technology 19K16054 and 17K14515
6 · The paper itself

Abstract

The inside of living cells is highly crowded with biological macromolecules. It has long been considered that the properties of nucleic acids and proteins, such as their structures, dynamics, interactions, and enzymatic activities, in intracellular environments are different from those under in vitro dilute conditions. In-cell NMR is a robust and powerful method used in the direct measurement of those properties in living cells. However, until 2 years ago, in-cell NMR was limited to Xenopus laevis oocytes due to technical challenges of incorporating exogenous nucleic acids. In the last 2 years, in-cell NMR spectra of nucleic acid introduced into living human cells have been reported. By use of the in-cell NMR spectra of nucleic acids in living human cells, the formation of hairpin structures with Watson-Crick base pairs, and i-motif and G-quadruplex structures with non-Watson-Crick base pairs was demonstrated. Others investigated the mRNA-antisense drug interactions and DNA-small compound interactions. In this article, we review these studies to underscore the potential of in-cell NMR for addressing the structures, dynamics, and interactions of nucleic acids in living human cells.

Indexed as

DNAHuman cellIn-cell NMRIntracellular structureRNAStreptolysin O (SLO)

Identifiers

PMID32144741
PMCPMC7242591

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.