Evidence map›Paper›PMID 32144387›Full record

ArticleScientific reports2020

Diet influences the functions of the human intestinal microbiome.

Maria De Angelis, Ilario Ferrocino, Francesco Maria Calabrese, Francesca De Filippis, Noemi Cavallo, Sonya Siragusa, Simone Rampelli, Raffaella Di Cagno, Kalliopi Rantsiou, Lucia Vannini and 12 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed, 4 pooled it
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 4 syntheses or guidelines pooled it, 170 citations in OpenAlex.

  1. Pooled it
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  7. Novel probiotic preparation withMicrobiology spectrum · 2024
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  16. The Role of the Gut Microbiome in Type 2 Diabetes Mellitus.International journal of molecular sciences · 2025
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42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 8 institutions in 2 countries.

Maria De AngelisDepartment of Soil, Plant and Food Science, University of Bari Aldo Moro, Bari, Italy.
Ilario FerrocinoDepartment of Agricultural, Forest and Food Science, University of Turin, Grugliasco, Italy.ORCID http://orcid.org/0000-0002-1657-0054
Francesco Maria CalabreseDepartment of Soil, Plant and Food Science, University of Bari Aldo Moro, Bari, Italy.
Francesca De FilippisDepartment of Agricultural Sciences and Task Force on Microbiome Studies, University of Naples Federico II, Portici, Italy.ORCID http://orcid.org/0000-0002-3474-2884
Noemi CavalloDepartment of Soil, Plant and Food Science, University of Bari Aldo Moro, Bari, Italy.
Sonya SiragusaDepartment of Soil, Plant and Food Science, University of Bari Aldo Moro, Bari, Italy.
Simone RampelliDepartment of Pharmacy and Biotechnology, Alma Mater Studiorum University of Bologna, Bologna, Italy.ORCID http://orcid.org/0000-0002-5655-6695
Raffaella Di CagnoFaculty of Science and Technology, Free University of Bozen, Bozen, Italy.
Kalliopi RantsiouDepartment of Agricultural, Forest and Food Science, University of Turin, Grugliasco, Italy.
Lucia VanniniDepartment of Agricultural and Food Sciences, Alma Mater Studiorum University of Bologna, and Inter-Departmental Centre for Industrial Agri-Food Research, Alma Mater Studiorum University of Bologna, Cesena, Italy.
Nicoletta PellegriniFood and Drug Department, University of Parma, Parma, Italy.ORCID http://orcid.org/0000-0002-9178-5274
Camilla LazziFood and Drug Department, University of Parma, Parma, Italy.
Silvia TurroniDepartment of Pharmacy and Biotechnology, Alma Mater Studiorum University of Bologna, Bologna, Italy.ORCID http://orcid.org/0000-0003-2345-9482
Nicola LorussoDepartment of Biology, University of Bari Aldo Moro, Bari, Italy.
Mario VenturaDepartment of Biology, University of Bari Aldo Moro, Bari, Italy.ORCID http://orcid.org/0000-0001-7762-8777
Marcello ChieppaNational Institute of Gastroenterology "S. de Bellis", Castellana Grotte, Bari, Italy.ORCID http://orcid.org/0000-0001-9819-0823
Erasmo NevianiFood and Drug Department, University of Parma, Parma, Italy.
Patrizia BrigidiDepartment of Pharmacy and Biotechnology, Alma Mater Studiorum University of Bologna, Bologna, Italy.
Paul W O'TooleDepartment of Microbiology and Alimentary Pharmabiotic Centre, University College Cork, Cork, Ireland.
Danilo ErcoliniDepartment of Agricultural Sciences and Task Force on Microbiome Studies, University of Naples Federico II, Portici, Italy.ORCID http://orcid.org/0000-0003-3061-9560
Marco GobbettiFaculty of Science and Technology, Free University of Bozen, Bozen, Italy. marco.gobbetti@unibz.it.
Luca CocolinDepartment of Agricultural, Forest and Food Science, University of Turin, Grugliasco, Italy.ORCID http://orcid.org/0000-0003-4799-7074
University of Bari Aldo Moro · ITUniversity of Bologna · ITUniversity of Parma · ITUniversity of Turin · ITFree University of Bozen-Bolzano · ITUniversity of Naples Federico II · ITGastroenterology Hospital "Saverio de Bellis" · ITUniversity College Cork · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gut microbes programme their metabolism to suit intestinal conditions and convert dietary components into a panel of small molecules that ultimately affect host physiology. To unveil what is behind the effects of key dietary components on microbial functions and the way they modulate host-microbe interaction, we used for the first time a multi-omic approach that goes behind the mere gut phylogenetic composition and provides an overall picture of the functional repertoire in 27 fecal samples from omnivorous, vegan and vegetarian volunteers. Based on our data, vegan and vegetarian diets were associated to the highest abundance of microbial genes/proteins responsible for cell motility, carbohydrate- and protein-hydrolyzing enzymes, transport systems and the synthesis of essential amino acids and vitamins. A positive correlation was observed when intake of fiber and the relative fecal abundance of flagellin were compared. Microbial cells and flagellin extracted from fecal samples of 61 healthy donors modulated the viability of the human (HT29) colon carcinoma cells and the host response through the stimulation of the expression of Toll-like receptor 5, lectin RegIIIα and three interleukins (IL-8, IL-22 and IL-23). Our findings concretize a further and relevant milestone on how the diet may prevent/mitigate disease risk.

Indexed as

DietGastrointestinal MicrobiomeCell Line, TumorComputational BiologyFecesHumansMetabolic Networks and PathwaysMetagenomeMetagenomicsNitrogenNitrogen

Identifiers

PMID32144387
PMCPMC7060259
OpenAlexW3009713747

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.