Evidence map›Paper›PMID 32144088›Full record

ArticleGenome research2020

Gene expression networks in the

Logan J Everett, Wen Huang, Shanshan Zhou, Mary Anna Carbone, Richard F Lyman, Gunjan H Arya, Matthew S Geisz, Junwu Ma, Fabio Morgante, Genevieve St Armour and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 74 citations in OpenAlex.

  1. Naturally Occurring Variability in the Regulatory Region of theInternational journal of molecular sciences · 2026
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  11. The genetic basis of incipient sexual isolation inProceedings. Biological sciences · 2024
    Article
  12. Article
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  15. Review
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  19. Viruses in LaboratoryViruses · 2023
    Article
  20. Natural selection has driven the recurrent loss of an immunity gene that protectsProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Logan J Everett *Program in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Wen Huang *Program in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Shanshan ZhouProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Mary Anna CarboneProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Richard F LymanProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Gunjan H AryaProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Matthew S GeiszProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Junwu MaKey Laboratory for Animal Biotechnology of Jiangxi Province and the Ministry of Agriculture of China, JiangXi Agricultural University, JiangXi, China.
Fabio MorganteProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Genevieve St ArmourProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Lavanya TurlapatiProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Robert R H AnholtProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
Trudy F C MackayProgram in Genetics, W.M. Keck Center for Behavioral Biology and Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina 27695-7614, USA.
North Carolina State University · USJiangxi Agricultural University · CNUniversity of North Carolina at Chapel Hill · US

Funding

QUANTITATIVE TRAIT LOCI IN DROSOPHILAR01GM045146 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 1991 to 2012
$5.1M
Genetics of Cocaine Sensitivity in DrosophilaU01DA041613 · NIDA · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Robert R. H Anholt, TRUDY F. MACKAY · 2017 to 2026
$4.9M
Genetics of Alcohol Sensitivity in DrosophilaR01AA016560 · NIAAA · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 2007 to 2016
$4.0M
Systems Genetics of Drosophila Life SpanR01AG043490 · NIA · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, CARBONE, MARY ANNA · 2013 to 2017
$1.9M
Reverse Engineering Quantitative Genetic VariationR01GM128974 · NIGMS · CLEMSON UNIVERSITY · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 2018 to 2021
$1.9M
NIAAA NIH HHS R01 AA016560NIA NIH HHS R01 AG043490NIDA NIH HHS U01 DA041613NIGMS NIH HHS R01 GM045146NIGMS NIH HHS R01 GM128974
6 · The paper itself

Abstract

A major challenge in modern biology is to understand how naturally occurring variation in DNA sequences affects complex organismal traits through networks of intermediate molecular phenotypes. This question is best addressed in a genetic mapping population in which all molecular polymorphisms are known and for which molecular endophenotypes and complex traits are assessed on the same genotypes. Here, we performed deep RNA sequencing of 200

Indexed as

Gene Expression RegulationGene Regulatory NetworksAnimalsDNA Transposable ElementsDrosophila melanogasterFemaleGenetic VariationHigh-Throughput Nucleotide SequencingMaleMicrobiotaQuantitative Trait LociSequence Analysis, RNADNA Transposable Elements

Identifiers

PMID32144088
PMCPMC7111517
OpenAlexW3010261971

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.