Evidence map›Paper›PMID 32143631›Full record

ArticleBMC veterinary research2020

Approaches to overcome flow cytometry limitations in the analysis of cells from veterinary relevant species.

Julia Hunka, John T Riley, Gudrun F Debes

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

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  13. Betamethasone induces potent immunosuppression and reduces HIV infection in a PBMC in vitro model.Journal of investigative medicine : the official publication of the American Federation for Clinical Research · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Julia HunkaDepartment of Microbiology and Immunology, Sidney Kimmel Medical College and Sidney Kimmel Cancer Center, Thomas Jefferson University, 233 S 10th Street, Philadelphia, PA, 19107, USA.
John T RileyDepartment of Microbiology and Immunology, Sidney Kimmel Medical College and Sidney Kimmel Cancer Center, Thomas Jefferson University, 233 S 10th Street, Philadelphia, PA, 19107, USA.
Gudrun F DebesDepartment of Microbiology and Immunology, Sidney Kimmel Medical College and Sidney Kimmel Cancer Center, Thomas Jefferson University, 233 S 10th Street, Philadelphia, PA, 19107, USA. Gudrun.debes@jefferson.edu.
Thomas Jefferson University · USSidney Kimmel Cancer Center · US

Funding

Migration and function of skin B cellsR01AR067751 · NIAMS · THOMAS JEFFERSON UNIVERSITY · PI DEBES, GUDRUN PHILOMENA · 2016 to 2020
$1.7M
Migration and function of cutaneous B cellsR01AI127389 · NIAID · THOMAS JEFFERSON UNIVERSITY · PI DEBES, GUDRUN PHILOMENA · 2017 to 2021
$1.6M
National Institute of Allergy and Infectious Diseases R01AI127389NIAID NIH HHS R01 AI127389NIAMS NIH HHS R01 AR067751NIAMS NIH HHS R01AR067751Thomas Jefferson University Ethel Brown Foerderer Foundation Fellowship
6 · The paper itself

Abstract

backgroundFlow cytometry is a powerful tool for the multiparameter analysis of leukocyte subsets on the single cell level. Recent advances have greatly increased the number of fluorochrome-labeled antibodies in flow cytometry. In particular, an increase in available fluorochromes with distinct excitation and emission spectra combined with novel multicolor flow cytometers with several lasers have enhanced the generation of multidimensional expression data for leukocytes and other cell types. However, these advances have mainly benefited the analysis of human or mouse cell samples given the lack of reagents for most animal species. The flow cytometric analysis of important veterinary, agricultural, wildlife, and other animal species is still hampered by several technical limitations, even though animal species other than the mouse can serve as more accurate models of specific human physiology and diseases.

resultsHere we present time-tested approaches that our laboratory regularly uses in the multiparameter flow cytometric analysis of ovine leukocytes. The discussed approaches will be applicable to the analysis of cells from most animal species and include direct modification of antibodies by covalent conjugation or Fc-directed labeling (Zenon™ technology), labeled secondary antibodies and other second step reagents, labeled receptor ligands, and antibodies with species cross-reactivity.

conclusionsUsing refined technical approaches, the number of parameters analyzed by flow cytometry per cell sample can be greatly increased, enabling multidimensional analysis of rare samples and giving critical insight into veterinary and other less commonly analyzed species. By maximizing information from each cell sample, multicolor flow cytometry can reduce the required number of animals used in a study.

Indexed as

AnimalsAntibodies, MonoclonalAntigensFlow CytometryFluorescent Antibody TechniqueFluorescent DyesLeukocytesSheepAntibodies, MonoclonalAntigensFluorescent DyesFlow cytometryMultiparameterVeterinary species

Identifiers

PMID32143631
PMCPMC7060616
OpenAlexW3009688668

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.