Evidence map›Paper›PMID 32143575›Full record

ArticleBMC plant biology2020

Unique miRNAs and their targets in tomato leaf responding to combined drought and heat stress.

Rong Zhou, Xiaqing Yu, Carl-Otto Ottosen, Tingling Zhang, Zhen Wu, Tongmin Zhao

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
10.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 73 citations in OpenAlex.

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  20. Down-Regulation of Cytokinin Receptor GenePlants (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Rong ZhouLaboratory for Genetic Improvement of High Efficiency Horticultural Crops in Jiangsu Province, Institute of Vegetable Crop, Jiangsu Province Academy of Agricultural Sciences, Nanjing, Jiangsu, China. rong.zhou@food.au.dk.ORCID http://orcid.org/0000-0001-5755-1258
Xiaqing YuNanjing Agricultural University, Nanjing, Jiangsu, China.
Carl-Otto OttosenDepartment of Food Science, Aarhus University, Aarhus, Denmark.
Tingling ZhangShanghai Qingpu Vegetable Technology Promotion Station, Shanghai, China.
Zhen WuNanjing Agricultural University, Nanjing, Jiangsu, China.
Tongmin ZhaoLaboratory for Genetic Improvement of High Efficiency Horticultural Crops in Jiangsu Province, Institute of Vegetable Crop, Jiangsu Province Academy of Agricultural Sciences, Nanjing, Jiangsu, China. tmzhaomail@163.com.
Aarhus University · DKNanjing Agricultural University · CNJiangsu Academy of Agricultural Sciences · CN

Funding

Aarhus Universitets Forskningsfond 30379National Natural Science Foundation of China 31601745Natural Science Foundation of Jiangsu Province BK20160579
6 · The paper itself

Abstract

backgroundBoth drought and heat stress are serious global problems, leading to agricultural production loss. MicroRNAs (miRNAs) play important roles in plant species responding to individual drought and heat stress. However, the miRNAs and mRNAs in association with combined drought and heat in crops like tomato remains unclear.

resultsWe studied the crosstalk of miRNAs and their target genes in tomato plants grown under simultaneous drought and heat stress that frequently happen in field conditions. In total, 335 known miRNAs representing 55 miRNA families and 430 potential novel miRNAs were identified in Solanum lycopersicum L. using small RNA deep sequencing. Through expression analysis, miRNAs in association with drought, heat and the combination of these were investigated. In total, 61, 74 and 37 miRNAs were differentially regulated for combination (of both stresses) vs control, combination vs drought and combination vs heat, respectively. Target genes with different expression levels were found using degradome sequencing, which were mainly involved in transcription factor activity, sequence-specific DNA binding, transcription, regulation of transcription, nucleus, DNA binding etc. The quantitative real-time polymerase chain reaction (qRT-PCR) results confirmed the accuracy of sequencing.

conclusionsOur study serves as valuable knowledge on how crop adapted to combined drought and heat stress by regulating miRNAs and mRNAs, which provide information for crop improvement to deal with future climate changes.

Indexed as

DroughtsHot TemperatureHeat-Shock ResponseMicroRNAsPlant LeavesRNA, PlantSolanum lycopersicumStress, PhysiologicalMicroRNAsRNA, PlantCombined abiotic stressDegradomeFunctional analysismiRNAsSolanum lycopersicum L.

Identifiers

PMID32143575
PMCPMC7060562
OpenAlexW3012225443

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.