Evidence map›Paper›PMID 32142200›Full record

ReviewEvolutionary anthropology2020

Studying human and nonhuman primate evolutionary biology with powerful in vitro and in vivo functional genomics tools.

Kathleen E Grogan, George H Perry

Abstract readReview
In one paragraph

Review in Evolutionary anthropology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant, "subfossil" koala lemurProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. TheeLife · 2021
    Article
  6. Integration of lncRNA and mRNA profiles to reveal the protective effects ofInternational journal of molecular medicine · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kathleen E GroganDepartment of Anthropology, Pennsylvania State University, University Park, Pennsylvania.ORCID https://orcid.org/0000-0002-0112-1766
George H PerryDepartment of Anthropology, Pennsylvania State University, University Park, Pennsylvania.ORCID https://orcid.org/0000-0003-4527-3806

Funding

Hunter-gatherer vs. agriculturalist growth and immune system functional genomicsR01GM115656 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI PERRY, GEORGE HERBERT · 2016 to 2020
$1.5M
Functional epigenomics of growth and development in human hunter-gatherers and agriculturalistsF32GM123634 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI GROGAN, KATHLEEN ELIZABETH · 2017 to 2019
$184k
NIGMS NIH HHS F32 GM123634NIGMS NIH HHS R01 GM115656NIH HHS GM115656NIH HHS GM123634
6 · The paper itself

Abstract

In recent years, tools for functional genomic studies have become increasingly feasible for use by evolutionary anthropologists. In this review, we provide brief overviews of several exciting in vitro techniques that can be paired with "-omics" approaches (e.g., genomics, epigenomics, transcriptomics, proteomics, and metabolomics) for potentially powerful evolutionary insights. These in vitro techniques include ancestral protein resurrection, cell line experiments using primary, immortalized, and induced pluripotent stem cells, and CRISPR-Cas9 genetic manipulation. We also discuss how several of these methods can be used in vivo, for transgenic organism studies of human and nonhuman primate evolution. Throughout this review, we highlight example studies in which these approaches have already been used to inform our understanding of the evolutionary biology of modern and archaic humans and other primates while simultaneously identifying future opportunities for anthropologists to use this toolkit to help answer additional outstanding questions in evolutionary anthropology.

Indexed as

Biological EvolutionGenomeGenomicsPrimatesAnimalsGenome, HumanHumansancestral protein reconstructioncell linesCRISPR-Cas9evolutionary genomicsin vitro assaysiPSCstransgenic organisms

Identifiers

PMID32142200
PMCPMC10574139

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.