Evidence map›Paper›PMID 32141733›Full record

ArticleACS chemical biology2020

Studies of Thioamide Effects on Serine Protease Activity Enable Two-Site Stabilization of Cancer Imaging Peptides.

Taylor M Barrett, Xing S Chen, Chunxiao Liu, Sam Giannakoulias, Hoang Anh T Phan, Jieliang Wang, E Keith Keenan, Richard J Karpowicz, E James Petersson

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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  6. Thioamide Analogues of MHC I Antigen Peptides.Journal of the American Chemical Society · 2023
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  15. Light-Emitting Probes for Labeling Peptides.Cell reports. Physical science · 2020
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Taylor M BarrettDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Xing S ChenDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Chunxiao LiuDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Sam GiannakouliasDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Hoang Anh T PhanDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Jieliang WangDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
E Keith KeenanDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Richard J KarpowiczDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
E James PeterssonDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.ORCID 0000-0003-3854-9210
University of Pennsylvania · USChina Agricultural University · CN

Funding

Institutional Clinical and Translational Science AwardUL1TR000003 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2012 to 2015
$38.9M
Predoctoral Training at the Chemistry-Biology InterfaceT32GM071339 · NIGMS · WISTAR INSTITUTE · PI MARMORSTEIN, RONEN, SPEICHER, DAVID W. · 2005 to 2019
$3.2M
Predoctoral Training at the Chemistry-Biology InterfaceT32GM133398 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Ronen Marmorstein, Ernest James Petersson · 2020 to 2026
$2.4M
Protocol Driven Hemodynamic Support in Septic ShockK23GM071399 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI SEVRANSKY, JONATHAN E · 2005 to 2009
$671k
Time-Of-Flight Instrument with Variable Ionization SourcesS10RR023444 · NCRR · UNIVERSITY OF PENNSYLVANIA · PI DMOCHOWSKI, IVAN JULIAN · 2007 to 2007
$308k
NCATS NIH HHS UL1 TR000003NCRR NIH HHS S10 RR023444NIGMS NIH HHS K23 GM071399NIGMS NIH HHS T32 GM071339NIGMS NIH HHS T32 GM133398
6 · The paper itself

Abstract

Thioamide substitutions in peptides can be used as fluorescence quenchers in protease sensors and as stabilizing modifications of hormone analogs. To guide these applications in the context of serine proteases, we here examine the cleavage of several model substrates, scanning a thioamide between the P3 and P3' positions, and identify perturbing positions for thioamide substitution. While all serine proteases tested were affected by P1 thioamidation, certain proteases were also significantly affected by other thioamide positions. We demonstrate how these findings can be applied by harnessing the combined P3/P1 effect of a single thioamide on kallikrein proteolysis to protect two key positions in a neuropeptide Y-based imaging probe, increasing its serum half-life to >24 h while maintaining potency for binding to Y1 receptor expressing cells. Such stabilized peptide probes could find application in imaging cell populations in animal models or even in clinical applications such as fluorescence-guided surgery.

Indexed as

Amino Acid SequenceAnimalsCatalytic DomainCell LineEnzyme StabilityFluorescent DyesHumansKallikreinsMiceModels, TheoreticalMolecular Docking SimulationNeoplasmsOptical ImagingPeptidesProtein ConformationProteolysisFluorescent DyesKallikreinsneuropeptide Y-Y1 receptorPeptidesReceptors, Neuropeptide YSerine ProteasesThioamides

Identifiers

PMID32141733
PMCPMC7759718
OpenAlexW3009569167

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.