Evidence map›Paper›PMID 32140870›Full record

ArticleJournal of medical systems2020

Conventional Filtering Versus U-Net Based Models for Pulmonary Nodule Segmentation in CT Images.

Joana Rocha, António Cunha, Ana Maria Mendonça

Abstract read
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In one paragraph

Article in Journal of medical systems, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  8. Review
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  10. Pulmonary nodule segmentation based on REMU-Net.Physical and engineering sciences in medicine · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Joana RochaFaculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200 - 465, Porto, Portugal. joana866rocha@gmail.com.ORCID http://orcid.org/0000-0002-4856-138X
António CunhaINESC Technology and Science, Rua Dr. Roberto Frias s/n, 4200 - 465, Porto, Portugal.
Ana Maria MendonçaFaculdade de Engenharia, Universidade do Porto, Rua Dr. Roberto Frias s/n, 4200 - 465, Porto, Portugal.

Funding

Fundação para a Ciência e a Tecnologia UID/EEA/50014/2019
6 · The paper itself

Abstract

Lung cancer is considered one of the deadliest diseases in the world. An early and accurate diagnosis aims to promote the detection and characterization of pulmonary nodules, which is of vital importance to increase the patients' survival rates. The mentioned characterization is done through a segmentation process, facing several challenges due to the diversity in nodular shape, size, and texture, as well as the presence of adjacent structures. This paper tackles pulmonary nodule segmentation in computed tomography scans proposing three distinct methodologies. First, a conventional approach which applies the Sliding Band Filter (SBF) to estimate the filter's support points, matching the border coordinates. The remaining approaches are Deep Learning based, using the U-Net and a novel network called SegU-Net to achieve the same goal. Their performance is compared, as this work aims to identify the most promising tool to improve nodule characterization. All methodologies used 2653 nodules from the LIDC database, achieving a Dice score of 0.663, 0.830, and 0.823 for the SBF, U-Net and SegU-Net respectively. This way, the U-Net based models yield more identical results to the ground truth reference annotated by specialists, thus being a more reliable approach for the proposed exercise. The novel network revealed similar scores to the U-Net, while at the same time reducing computational cost and improving memory efficiency. Consequently, such study may contribute to the possible implementation of this model in a decision support system, assisting the physicians in establishing a reliable diagnosis of lung pathologies based on this segmentation task.

Indexed as

Tomography, X-Ray ComputedDeep LearningDiagnosis, Computer-AssistedHumansLung NeoplasmsMultiple Pulmonary NodulesRadiographic Image Interpretation, Computer-AssistedComputer-aided diagnosisConventionalDeep learningImage analysisLungNoduleSegmentation

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.