Evidence map›Paper›PMID 32140747›Full record

ArticleCellular and molecular life sciences : CMLS2021

Crystal structures of human NSDHL and development of its novel inhibitor with the potential to suppress EGFR activity.

Dong-Gyun Kim, Sujin Cho, Kyu-Yeon Lee, Seung-Ho Cheon, Hye-Jin Yoon, Joo-Youn Lee, Dongyoon Kim, Kwang-Soo Shin, Choong-Hyun Koh, Ji Sung Koo and 13 more

Open access · greenAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

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  5. Structural enzymology of cholesterol biosynthesis and storage.Current opinion in structural biology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 2 countries.

Dong-Gyun KimResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Sujin ChoResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Kyu-Yeon LeeResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Seung-Ho CheonResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Hye-Jin YoonDepartment of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
Joo-Youn LeeChemical Data-Driven Research Center, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Dongyoon KimResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Kwang-Soo ShinResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Choong-Hyun KohResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Ji Sung KooResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Yuri ChoiDepartment of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
Hyung Ho LeeDepartment of Chemistry, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
Yu-Kyoung OhResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Yoo-Seong JeongResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Suk-Jae ChungResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Moonkyu BaekTherapeutics & Biotechnology Division, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Kwan-Young JungTherapeutics & Biotechnology Division, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Hyo Jin LimResearch Institute, National Cancer Center, Goyang-si, Gyeonggi-do, 10408, Republic of Korea.
Hyoun Sook KimResearch Institute, National Cancer Center, Goyang-si, Gyeonggi-do, 10408, Republic of Korea.
Sung Jean ParkGachon Institute of Pharmaceutical Sciences, College of Pharmacy, Gachon University, Incheon, 13120, Republic of Korea.
Jeong-Yeon LeeDepartment of Medicine, College of Medicine, Hanyang University, Seoul, 04763, Republic of Korea.
Sang Jae LeePAL-XFEL, Pohang Accelerator Laboratory, POSTECH, Pohang, Gyeongbuk, 37673, Republic of Korea. sangjaelee@postech.ac.kr.
Bong-Jin LeeResearch Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea. lbj@nmr.snu.ac.kr.ORCID http://orcid.org/0000-0001-7896-2961
Seoul National University · KRKorea Research Institute of Chemical Technology · KRNational Cancer Center · KRGachon University · KRPohang University of Science and Technology · KR

Funding

National Research Foundation of Korea NRF-2016R1C1B2014609National Research Foundation of Korea NRF-2017R1C1B2012225National Research Foundation of Korea NRF-2018R1A2A1A19018526National Research Foundation of Korea NRF-2018R1A5A2024425National Research Foundation of Korea NRF-2018R1A6B4023605National Research Foundation of Korea NRF-2019R1H1A1102102
6 · The paper itself

Abstract

NAD(P)-dependent steroid dehydrogenase-like (NSDHL), an essential enzyme in human cholesterol synthesis and a regulator of epidermal growth factor receptor (EGFR) trafficking pathways, has attracted interest as a therapeutic target due to its crucial relevance to cholesterol-related diseases and carcinomas. However, the development of pharmacological agents for targeting NSDHL has been hindered by the absence of the atomic details of NSDHL. In this study, we reported two X-ray crystal structures of human NSDHL, which revealed a detailed description of the coenzyme-binding site and the unique conformational change upon the binding of a coenzyme. A structure-based virtual screening and biochemical evaluation were performed and identified a novel inhibitor for NSDHL harboring suppressive activity towards EGFR. In EGFR-driven human cancer cells, treatment with the potent NSDHL inhibitor enhanced the antitumor effect of an EGFR kinase inhibitor. Overall, these findings could serve as good platforms for the development of therapeutic agents against NSDHL-related diseases.

Indexed as

3-Hydroxysteroid DehydrogenasesBinding SitesCell Line, TumorCell SurvivalCholesterolCrystallography, X-RayEnzyme InhibitorsErbB ReceptorsErlotinib HydrochlorideHumansKineticsMolecular Docking SimulationMutagenesis, Site-DirectedNADProtein Structure, TertiaryRecombinant Proteins3-Hydroxysteroid DehydrogenasesCholesterolEGFR protein, humanEnzyme InhibitorsErbB ReceptorsErlotinib HydrochlorideNADNsdhl protein, humanRecombinant ProteinsCholesterol synthesis pathwayEGFRMembrane-anchored proteinNSDHLStructure-based drug design

Identifiers

PMID32140747
PMCPMC11068002
OpenAlexW3010171804

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.