Evidence map›Paper›PMID 32134945›Full record

ArticlePloS one2020

Gut microbiome shifts with urbanization and potentially facilitates a zoonotic pathogen in a wading bird.

Maureen H Murray, Emily W Lankau, Anjelika D Kidd, Catharine N Welch, Taylor Ellison, Henry C Adams, Erin K Lipp, Sonia M Hernandez

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
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  5. Review
  6. Gut Microbiome Variations in Herring Gulls (Animals : an open access journal from MDPI · 2026
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  7. Article
  8. Article
  9. Article
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  12. Review
  13. Article
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  18. Rusa deer microbiota: the importance of preliminary data analysis for meaningful diversity comparisons.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Maureen H MurrayWarnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, United States of America.ORCID 0000-0002-2591-0794
Emily W LankauUniversity of Wisconsin Department of Animal Sciences, Madison, Wisconsin, United States of America.
Anjelika D KiddWarnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, United States of America.
Catharine N WelchWarnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, United States of America.
Taylor EllisonWarnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, United States of America.
Henry C AdamsWarnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, United States of America.
Erin K LippDepartment of Environmental Health Science, University of Georgia, Athens, Georgia, United States of America.
Sonia M HernandezWarnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia, United States of America.ORCID 0000-0002-6336-7286

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial communities in the gastrointestinal tract influence many aspects of host health, including metabolism and susceptibility to pathogen colonization. These relationships and the environmental and individual factors that drive them are relatively unexplored for free-living wildlife. We quantified the relationships between urban habitat use, diet, and age with microbiome composition and diversity for 82 American white ibises (Eudocimus albus) captured along an urban gradient in south Florida and tested whether gut microbial diversity was associated with Salmonella enterica prevalence. Shifts in community composition were significantly associated with urban land cover and, to a lesser extent, diets higher in provisioned food. The diversity of genera was negatively associated with community composition associated with urban land cover, positively associated with age class, and negatively associated with Salmonella shedding. Our results suggest that shifts in both habitat use and diet for urban birds significantly alter gut microbial composition and diversity in ways that may influence health and pathogen susceptibility as species adapt to urban habitats.

Indexed as

Gastrointestinal MicrobiomeAnimalsBirdsDietEcosystemIntestinesPrincipal Component AnalysisRNA, Ribosomal, 16SSalmonella entericaRNA, Ribosomal, 16S

Identifiers

PMID32134945
PMCPMC7058277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.