Evidence map›Paper›PMID 32134142›Full record

ArticleBiotechnology and applied biochemistry2020

Artificial iron hydrogenase made by covalent grafting of Knölker's complex into xylanase: Application in asymmetric hydrogenation of an aryl ketone in water.

Kalani Kariyawasam, Wadih Ghattas, Yossef López De Los Santos, Nicolas Doucet, Sylvain Gaillard, Jean-Luc Renaud, Frédéric Avenier, Jean-Pierre Mahy, Rémy Ricoux

Open access · bronzeAbstract read
In one paragraph

Article in Biotechnology and applied biochemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Kalani KariyawasamInstitut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Université Paris-sud, Université Paris-Saclay, Orsay cedex, France.
Wadih GhattasInstitut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Université Paris-sud, Université Paris-Saclay, Orsay cedex, France.ORCID https://orcid.org/0000-0001-6743-6253
Yossef López De Los SantosCentre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), Université du Québec, Réseau International des Instituts Pasteur, Laval (Québec), Canada.ORCID https://orcid.org/0000-0001-5929-0370
Nicolas DoucetCentre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), Université du Québec, Réseau International des Instituts Pasteur, Laval (Québec), Canada.ORCID https://orcid.org/0000-0002-1952-9380
Sylvain GaillardUniversité de Caen-Ecole Nationale Supérieure d'Ingénieurs de Caen Laboratoire de Chimie Moléculaire et Thioorganique - UMR CNRS 6507, Caen, France.ORCID https://orcid.org/0000-0003-3402-2518
Jean-Luc RenaudUniversité de Caen-Ecole Nationale Supérieure d'Ingénieurs de Caen Laboratoire de Chimie Moléculaire et Thioorganique - UMR CNRS 6507, Caen, France.ORCID https://orcid.org/0000-0001-8757-9622
Frédéric AvenierInstitut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Université Paris-sud, Université Paris-Saclay, Orsay cedex, France.ORCID https://orcid.org/0000-0001-6910-3620
Jean-Pierre MahyInstitut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Université Paris-sud, Université Paris-Saclay, Orsay cedex, France.ORCID https://orcid.org/0000-0001-6502-7923
Rémy RicouxInstitut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Université Paris-sud, Université Paris-Saclay, Orsay cedex, France.ORCID https://orcid.org/0000-0002-3464-7895
Centre National de la Recherche Scientifique · FRInstitut National de la Recherche Scientifique · CA

Funding

Conformational sub-states in enzyme catalysis: Applications to ribonucleaseR01GM105978 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI AGARWAL, PRATUL K, CHENNUBHOTLA, SRINIVAS CHAKRA · 2014 to 2018
$2.8M
Agence Nationale de la Recherche ANR-11-LABEX-0039Agence Nationale de la Recherche ANR-17-CE11-0014-02Fonds de Recherche Québec - SantéNational Institute of General Medical Sciences (NIGMS) of the National Institutes of Health (NIH) R01GM105978Natural Sciences and Engineering Research Council of Canada RGPIN-2016-05557NIGMS NIH HHS R01 GM105978
6 · The paper itself

Abstract

We report a new artificial hydrogenase made by covalent anchoring of the iron Knölker's complex to a xylanase S212C variant. This artificial metalloenzyme was found to be able to catalyze efficiently the transfer hydrogenation of the benchmark substrate trifluoroacetophenone by sodium formate in water, yielding the corresponding secondary alcohol as a racemic. The reaction proceeded more than threefold faster with the XlnS212CK biohybrid than with the Knölker's complex alone. In addition, efficient conversion of trifluoroacetophenone to its corresponding alcohol was reached within 60 H with XlnS212CK, whereas a ≈2.5-fold lower conversion was observed with Knölker's complex alone as catalyst. Moreover, the data were rationalized with a computational strategy suggesting the key factors of the selectivity. These results suggested that the Knölker's complex was most likely flexible and could experience free rotational reorientation within the active-site pocket of Xln A, allowing it to access the subsite pocket populated by trifluoroacetophenone.

Indexed as

Bacterial ProteinsCatalysisEndo-1,4-beta XylanasesHydrogenaseHydrogenationIron-Sulfur ProteinsStreptomyces lividansWaterBacterial ProteinsEndo-1,4-beta XylanasesHydrogenaseiron hydrogenaseIron-Sulfur ProteinsWaterartificial metalloenzymescatalysishydrogenationKnölker's complex

Identifiers

PMID32134142
PMCPMC7483719
OpenAlexW3010020074

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.