Evidence map›Paper›PMID 32133046›Full record

ArticleOncotarget2020

DNA dependent protein kinase (DNA-PK) enhances HIV transcription by promoting RNA polymerase II activity and recruitment of transcription machinery at HIV LTR.

Sonia Zicari, Adhikarimayum Lakhikumar Sharma, Geetaram Sahu, Larisa Dubrovsky, Lin Sun, Han Yue, Tejaswi Jada, Alex Ochem, Gary Simon, Michael Bukrinsky and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Insights into the protein domains of C-VI TRIM subfamily in viral infection.Frontiers in cellular and infection microbiology · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. NSC95397 is a Novel HIV-1 Latency Reversing Agent.bioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Secrets of DNA-PKcs beyond DNA repair.NPJ precision oncology · 2024
    Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. DNA-PKcs restrictsFrontiers in immunology · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Sonia ZicariCenter for Translational Medicine, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Adhikarimayum Lakhikumar SharmaCenter for Translational Medicine, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Geetaram SahuDivision of Infectious Diseases, Department of Medicine, George Washington University, Washington DC 20037, USA.
Larisa DubrovskyDepartment of Microbiology, Immunology and Tropical Medicine, George Washington University, Washington DC 20037, USA.
Lin SunDivision of Infectious Diseases, Department of Medicine, George Washington University, Washington DC 20037, USA.
Han YueDivision of Infectious Diseases, Department of Medicine, George Washington University, Washington DC 20037, USA.
Tejaswi JadaDivision of Infectious Diseases, Department of Medicine, George Washington University, Washington DC 20037, USA.
Alex OchemInternational Centre for Genetic Engineering and Biotechnology (ICGEB), Wernher and Beit Building (South), Observatory 7925, Cape Town, South Africa.
Gary SimonDivision of Infectious Diseases, Department of Medicine, George Washington University, Washington DC 20037, USA.
Michael BukrinskyDepartment of Microbiology, Immunology and Tropical Medicine, George Washington University, Washington DC 20037, USA.
Mudit TyagiCenter for Translational Medicine, Thomas Jefferson University, Philadelphia, PA 19107, USA.
George Washington University · USBambino Gesù Children's Hospital · ITInternational Centre for Genetic Engineering and Biotechnology · ZAThomas Jefferson University · US

Funding

SWG 2: Cure Research Scientific Working GroupP30AI117970 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI Italo Mocchetti · 2015 to 2026
$29.6M
Characterization of cocaine induced signaling pathways that enhances HIV transcriptionR01DA041746 · NIDA · THOMAS JEFFERSON UNIVERSITY · PI TYAGI, MUDIT · 2017 to 2023
$2.3M
Cocaine enhances HIV replication by inducing transcriptionally active chromatin sR21DA033924 · NIDA · GEORGE WASHINGTON UNIVERSITY · PI TYAGI, MUDIT · 2013 to 2014
$436k
Cocaine induced selective epigenetic and signaling pathways enhance HIV replicatiR03DA033900 · NIDA · GEORGE WASHINGTON UNIVERSITY · PI TYAGI, MUDIT · 2013 to 2014
$317k
NIAID NIH HHS P30 AI117970NIDA NIH HHS R01 DA041746NIDA NIH HHS R03 DA033900NIDA NIH HHS R21 DA033924
6 · The paper itself

Abstract

Despite reductions in mortality from the use of highly active antiretroviral therapy (HAART), the presence of latent or transcriptionally silent proviruses prevents HIV cure/eradication. We have previously reported that DNA-dependent protein kinase (DNA-PK) facilitates HIV transcription by interacting with the RNA polymerase II (RNAP II) complex recruited at HIV LTR. In this study, using different cell lines and peripheral blood mononuclear cells (PBMCs) of HIV-infected patients, we found that DNA-PK stimulates HIV transcription at several stages, including initiation, pause-release and elongation. We are reporting for the first time that DNA-PK increases phosphorylation of RNAP II C-terminal domain (CTD) at serine 5 (Ser5) and serine 2 (Ser2) by directly catalyzing phosphorylation and by augmenting the recruitment of the positive transcription elongation factor (P-TEFb) at HIV LTR. Our findings suggest that DNA-PK expedites the establishment of euchromatin structure at HIV LTR. DNA-PK inhibition/knockdown leads to the severe impairment of HIV replication and reactivation of latent HIV provirus. DNA-PK promotes the recruitment of Tripartite motif-containing 28 (TRIM28) at LTR and assists the release of paused RNAP II through TRIM28 phosphorylation. These results provide the mechanisms through which DNA-PK controls the HIV gene expression and, likely, can be extended to cellular gene expression, including during cell malignancy, where the role of DNA-PK has been well-established.

Indexed as

DNA-PKDNA-PK inhibitorsHIVreplicationtranscription

Identifiers

PMID32133046
PMCPMC7041937
OpenAlexW3008921452

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.