Evidence map›Paper›PMID 32132206›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Assessing thyroid cancer risk using polygenic risk scores.

Sandya Liyanarachchi, Julius Gudmundsson, Egil Ferkingstad, Huiling He, Jon G Jonasson, Vinicius Tragante, Folkert W Asselbergs, Li Xu, Lambertus A Kiemeney, Romana T Netea-Maier and 11 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 58 citations in OpenAlex.

  1. Pooled it
  2. Investigation of Shared Genetic Risk Factors Between Parkinson's Disease and Cancers.Movement disorders : official journal of the Movement Disorder Society · 2023
    Pooled it
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Clinically Relevant Germline Variants in Children With Nonmedullary Thyroid Cancer.The Journal of clinical endocrinology and metabolism · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Evaluation of polygenic risk score for risk prediction of gastric cancer.World journal of gastrointestinal oncology · 2023
    Review
  16. Article
  17. Article
  18. Article
  19. Epidemiology of Thyroid Cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2022
    Article
  20. Expression ofMolecular medicine reports · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 4 countries.

Sandya LiyanarachchiHuman Cancer Genetics Program, Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210.
Julius GudmundssonDepartment of Population Genomics, deCODE genetics/Amgen Inc., 101 Reykjavik, Iceland.
Egil FerkingstadDepartment of Population Genomics, deCODE genetics/Amgen Inc., 101 Reykjavik, Iceland.
Huiling HeHuman Cancer Genetics Program, Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210.
Jon G JonassonDepartment of Pathology, Landspitali-University Hospital, 101 Reykjavik, Iceland.
Vinicius TraganteDepartment of Population Genomics, deCODE genetics/Amgen Inc., 101 Reykjavik, Iceland.
Folkert W AsselbergsDepartment of Cardiology, Heart and Lung Division, University Medical Center Utrecht, University of Utrecht, 3584 CX Utrecht, The Netherlands.
Li XuDepartment of Head and Neck Surgery, The University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Lambertus A KiemeneyRadboud Institute for Health Sciences, Radboud University Medical Centre, 6500HB Nijmegen, The Netherlands.
Romana T Netea-MaierDivision of Endocrinology, Department of Internal Medicine, Radboud Institute for Health Sciences, Radboud University Medical Centre, 6500HB Nijmegen, The Netherlands.
Jose I MayordomoUCHealth Diane O'Connor Thompson Breast Center, University of Colorado Hospital, Aurora, CO 80045.
Theo S PlantingaDepartment of Pathology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, 6500HB Nijmegen, The Netherlands.
Hannes HjartarsonHead&Neck Surgery Department, Landspitali-University Hospital, 101 Reykjavik, Iceland.
Jon HrafnkelssonDepartment of Oncology, Landspitali-University Hospital, 101 Reykjavik, Iceland.
Erich M SturgisDepartment of Head and Neck Surgery, The University of Texas MD Anderson Cancer Center, Houston, TX 77030.
Pamela BrockDepartment of Internal Medicine, Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210.
Fadi NabhanDivision of Endocrinology, Diabetes, and Metabolism, Department of Internal Medicine, The Ohio State University, Columbus, OH 43210.
Gudmar ThorleifssonDepartment of Population Genomics, deCODE genetics/Amgen Inc., 101 Reykjavik, Iceland.
Matthew D RingelDivision of Endocrinology, Diabetes, and Metabolism, Department of Internal Medicine, The Ohio State University, Columbus, OH 43210.
Kari StefanssonDepartment of Population Genomics, deCODE genetics/Amgen Inc., 101 Reykjavik, Iceland; kstefans@decode.is Albert.delaChapelle@osumc.edu.
Albert de la ChapelleHuman Cancer Genetics Program, Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210; kstefans@decode.is Albert.delaChapelle@osumc.edu.ORCID 0000-0001-9345-9248
deCODE Genetics (Iceland) · ISCancer Genetics (United States) · USRadboud University Nijmegen · NLReykjavík University · ISThe Ohio State University · USThe University of Texas MD Anderson Cancer Center · USUniversity of Colorado Hospital · USUtrecht University · NL

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Tasleem J Padamsee · 1985 to 2026
$132.3M
Selective Modulation of Thyroidal RadioiodineP01CA124570 · NCI · OHIO STATE UNIVERSITY · PI RINGEL, MATTHEW D · 2008 to 2017
$23.4M
NCI NIH HHS P01 CA124570NCI NIH HHS P30 CA016058
6 · The paper itself

Abstract

Genome-wide association studies (GWASs) have identified at least 10 single-nucleotide polymorphisms (SNPs) associated with papillary thyroid cancer (PTC) risk. Most of these SNPs are common variants with small to moderate effect sizes. Here we assessed the combined genetic effects of these variants on PTC risk by using summarized GWAS results to build polygenic risk score (PRS) models in three PTC study groups from Ohio (1,544 patients and 1,593 controls), Iceland (723 patients and 129,556 controls), and the United Kingdom (534 patients and 407,945 controls). A PRS based on the 10 established PTC SNPs showed a stronger predictive power compared with the clinical factors model, with a minimum increase of area under the receiver-operating curve of 5.4 percentage points (

Indexed as

Genetic Predisposition to DiseaseMultifactorial InheritanceAdultBiomarkers, TumorCase-Control StudiesCohort StudiesDNA Mutational AnalysisFemaleGenome-Wide Association StudyHumansIcelandMaleMiddle AgedModels, GeneticPenetrancePolymorphism, Single NucleotideBiomarkers, TumorGWASpolygenic risk scorerisk predictionthyroid cancer

Identifiers

PMID32132206
PMCPMC7084156
OpenAlexW3010609312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.