Evidence map›Paper›PMID 32131739›Full record

ArticleBMC plant biology2020

A transcriptomic view of the ability of nascent hexaploid wheat to tolerate aneuploidy.

Deying Zeng, Jiantao Guan, Jiangtao Luo, Laibin Zhao, Yazhou Li, Wenshuai Chen, Lianquan Zhang, Shunzong Ning, Zhongwei Yuan, Aili Li and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

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  10. Chromosome karyotype and stability of new synthetic hexaploid wheat.Molecular breeding : new strategies in plant improvement · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Deying ZengState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Jiantao GuanInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Jiangtao LuoCrop Research Institute, Sichuan Academy of Agricultural Science, Chengdu, 610066, Sichuan, China.
Laibin ZhaoState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Yazhou LiState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Wenshuai ChenState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Lianquan ZhangState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Shunzong NingState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Zhongwei YuanState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Aili LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Youliang ZhengState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Long MaoInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Dengcai LiuState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China.
Ming HaoTriticeae Research Institute, Sichuan Agricultural University at Chengdu, Wenjiang, 611130, Sichuan, China. haomingluo@foxmail.com.ORCID http://orcid.org/0000-0003-2693-3864
Sichuan Agricultural University · CNChinese Academy of Agricultural Sciences · CNSichuan Academy of Agricultural Sciences · CN

Funding

the National Key Research and Development Program of China 2016YFD0102000the National Natural Science Foundation of China 31661143007
6 · The paper itself

Abstract

backgroundIn contrast to most animal species, polyploid plant species are quite tolerant of aneuploidy. Here, the global transcriptome of four aneuploid derivatives of a synthetic hexaploid wheat line was acquired, with the goal of characterizing the relationship between gene copy number and transcript abundance.

resultsFor most of the genes mapped to the chromosome involved in aneuploidy, the abundance of transcripts reflected the gene copy number. Aneuploidy had a greater effect on the strength of transcription of genes mapped to the chromosome present in a noneuploid dose than on that of genes mapped elsewhere in the genome. Overall, changing the copy number of one member of a homeologous set had little effect on the abundance of transcripts generated from the set of homeologs as a whole, consistent with the tolerance of aneuploidy exhibited by allopolyploids, whether in the form of a chromosomal deficit (monosomy) or chromosomal excess (trisomy).

conclusionsOur findings shed new light on the genetic regulation of homeoallele transcription and contribute to a deeper understanding of allopolyploid genome evolution, with implications for the breeding of polyploid crops.

Indexed as

AneuploidyPolyploidyTranscriptomeGene DosageTriticumAneuploidyHomoeolog bufferingPolyploidSynthetic wheat

Identifiers

PMID32131739
PMCPMC7057484
OpenAlexW3009859940

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.