Evidence map›Paper›PMID 32130643›Full record

ArticlePlant molecular biology2020

AtDRO1 is nuclear localized in root tips under native conditions and impacts auxin localization.

Jessica M Waite, Tamara D Collum, Chris Dardick

Open access · hybridAbstract read
In one paragraph

Article in Plant molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Heterologous expression ofPlant signaling & behavior · 2025
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  3. Root Meristem Maintenance Mechanisms are Key to Plant Defense Against Nanoplastics.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
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  8. Durum wheat (Frontiers in plant science · 2024
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  11. Review
  12. Leveraging orthology within maize and Arabidopsis QTL to identify genes affecting natural variation in gravitropism.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Review
  14. Expression of PotatoFrontiers in plant science · 2022
    Article
  15. Review
  16. Article
  17. Wheat root systems as a breeding target for climate resilience.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Review
  18. Review
  19. Review
  20. Frontiers in plant science · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jessica M WaiteWashington State University Tree Fruit Research and Extension Center, Wenatchee, WA, 98801, USA.
Tamara D CollumUSDA-ARS Appalachian Fruit Research Station, Kearneysville, WV, 25430, USA.
Chris DardickUSDA-ARS Appalachian Fruit Research Station, Kearneysville, WV, 25430, USA. chris.dardick@usda.gov.ORCID http://orcid.org/0000-0002-7970-4937
Appalachian Fruit Research Laboratory · US

Funding

National Science Foundation 1339211USDA AFRI 10891264
6 · The paper itself

Abstract

DEEPER ROOTING 1 (DRO1) contributes to the downward gravitropic growth trajectory of roots upstream of lateral auxin transport in monocots and dicots. Loss of DRO1 function leads to horizontally oriented lateral roots and altered gravitropic set point angle, while loss of all three DRO family members results in upward, vertical root growth. Here, we attempt to dissect the roles of AtDRO1 by analyzing expression, protein localization, auxin gradient formation, and auxin responsiveness in the atdro1 mutant. Current evidence suggests AtDRO1 is predominantly a membrane-localized protein. Here we show that VENUS-tagged AtDRO1 driven by the native AtDRO1 promoter complemented an atdro1 Arabidopsis mutant and the protein was localized in root tips and detectable in nuclei. atdro1 primary and lateral roots showed impairment in establishing an auxin gradient upon gravistimulation as visualized with DII-VENUS, a sensor for auxin signaling and proxy for relative auxin distribution. Additionally, PIN3 domain localization was not significantly altered upon gravistimulation in atdro1 primary and lateral roots. RNA-sequencing revealed differential expression of known root development-related genes in atdro1 mutants. atdro1 lateral roots were able to respond to exogenous auxin and AtDRO1 gene expression levels in root tips were unaffected by the addition of auxin. Collectively, the data suggest that nuclear localization may be important for AtDRO1 function and suggests a more nuanced role for DRO1 in regulating auxin-mediated changes in lateral branch angle. KEY MESSAGE: DEEPER ROOTING 1 (DRO1) when expressed from its native promoter is predominately localized in Arabidopsis root tips, detectable in nuclei, and impacts auxin gradient formation.

Indexed as

ArabidopsisArabidopsis ProteinsCell NucleusGenetic Complementation TestGravitationIndoleacetic AcidsMutationNuclear ProteinsPlant RootsArabidopsis ProteinsAT1G72490 protein, ArabidopsisIndoleacetic AcidsNuclear ProteinsPIN3 protein, ArabidopsisGravitropic set pointIGT familyLAZY familyProtein localizationRoot system architecture

Identifiers

PMID32130643
PMCPMC7170825
OpenAlexW3009382047

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.