Evidence map›Paper›PMID 32130617›Full record

ArticleMolecular biology reports2020

Microsatellite primer development in elasmobranchs using next generation sequencing of enriched libraries.

Kevin A Feldheim, Rima W Jabado, Demian D Chapman, Diego Cardeñosa, J Dylan Maddox

Abstract read
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In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 2 countries.

Kevin A FeldheimPritzker Laboratory for Molecular Systematics and Evolution, Field Museum of Natural History, 1400 South Lake Shore Dr., Chicago, IL, 60605, USA. kfeldheim@fieldmuseum.org.ORCID http://orcid.org/0000-0002-5610-9262
Rima W JabadoElasmo Project, P.O. Box 29588, Dubai, United Arab Emirates.ORCID http://orcid.org/0000-0001-6239-6723
Demian D ChapmanDepartment of Biological Sciences, Florida International University, North Miami, FL, 33181, USA.
Diego CardeñosaSchool of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, 11794, USA.ORCID http://orcid.org/0000-0001-9414-7385
J Dylan MaddoxPritzker Laboratory for Molecular Systematics and Evolution, Field Museum of Natural History, 1400 South Lake Shore Dr., Chicago, IL, 60605, USA.ORCID http://orcid.org/0000-0002-6371-1083
American Public University System · USElasmo Project · AEField Museum of Natural History · USFlorida International University · USStony Brook University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsatellites are useful in studies of population genetics, sibship, and parentage. Here, we screened for microsatellites from multiple elasmobranch genomic libraries using an enrichment protocol followed by sequencing on an Illumina platform. We concurrently screened five and then nine genomes and describe the number of potential loci from each respective round of sequencing. To validate the efficacy of the protocol, we developed and tested primers for the pelagic thresher shark, Alopias pelagicus. The method described here is a cost-effective protocol to increase the pool of potential useful loci and allows the concurrent screening of multiple libraries.

Indexed as

AnimalsElasmobranchiiGene LibraryGenetics, PopulationHigh-Throughput Nucleotide SequencingMicrosatellite RepeatsSharksElasmobranchsMicrosatellitesPelagic thresher shark

Identifiers

PMID32130617
OpenAlexW3009717730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.