Evidence map›Paper›PMID 32130486›Full record

ArticleParasitology research2020

Fatty acid-binding proteins in Echinococcus spp.: the family has grown.

Jorge L Pórfido, Michaela Herz, Ferenc Kiss, Laura Kamenetzky, Klaus Brehm, Mara C Rosenzvit, Betina Córsico, Gisela R Franchini

Abstract read
PubMed Publisher
In one paragraph

Article in Parasitology research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Cestodes in the genomic era.Parasitology research · 2022
    Review
  6. Article
  7. Parasitology · 2021
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Jorge L PórfidoInstituto de Investigaciones Bioquímicas de La Plata (INIBIOLP), Facultad de Ciencias Médicas, Universidad Nacional de La Plata (UNLP)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata, Argentina.
Michaela HerzInstitut für Hygiene und Mikrobiologie, Universität Würzburg, Würzburg, Germany.
Ferenc KissInstitut für Hygiene und Mikrobiologie, Universität Würzburg, Würzburg, Germany.
Laura KamenetzkyInstituto de Investigaciones en Microbiología y Parasitología Médica (IMPaM), Facultad de Medicina, Universidad de Buenos Aires (UBA)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.
Klaus BrehmInstitut für Hygiene und Mikrobiologie, Universität Würzburg, Würzburg, Germany.
Mara C RosenzvitInstituto de Investigaciones en Microbiología y Parasitología Médica (IMPaM), Facultad de Medicina, Universidad de Buenos Aires (UBA)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.
Betina CórsicoInstituto de Investigaciones Bioquímicas de La Plata (INIBIOLP), Facultad de Ciencias Médicas, Universidad Nacional de La Plata (UNLP)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata, Argentina.
Gisela R FranchiniInstituto de Investigaciones Bioquímicas de La Plata (INIBIOLP), Facultad de Ciencias Médicas, Universidad Nacional de La Plata (UNLP)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), La Plata, Argentina. gfranchini@conicet.gov.ar.ORCID http://orcid.org/0000-0002-8355-357X
Consejo Nacional de Investigaciones Científicas y Técnicas · ARUniversity of Würzburg · DE

Funding

CONICET PIP 0739European Molecular Biology Organization ASTF 344-2011Fondo para la Investigación Científica y Tecnológica PICT 2013-2020Universidad Nacional de La Plata M188
6 · The paper itself

Abstract

Fatty acid-binding proteins (FABPs) are small intracellular proteins that reversibly bind fatty acids and other hydrophobic ligands. In cestodes, due to their inability to synthesise fatty acids de novo, FABPs have been proposed as essential proteins, and thus, as possible drug targets and/or carriers against these parasites. We performed data mining in Echinococcus multilocularis and Echinococcus granulosus genomes in order to test whether this family of proteins is more complex than previously reported. By exploring the genomes of E. multilocularis and E. granulosus, six genes coding for FABPs were found in each organism. In the case of E. granulosus, all of them have different coding sequences, whereas in E. multilocularis, two of the genes code for the same protein. Remarkably, one of the genes (in both cestodes) encodes a FABP with a C-terminal extension unusual for this family of proteins. The newly described genes present variations in their structure in comparison with previously described FABP genes in Echinococcus spp. The coding sequences for E. multilocularis were validated by cloning and sequencing. Moreover, differential expression patterns of FABPs were observed at different stages of the life cycle of E. multilocularis by exploring transcriptomic data from several sources. In summary, FABP family in cestodes is far more complex than previously thought and includes new members that seem to be only present in flatworms.

Indexed as

Amino Acid SequenceAnimalsBase SequenceDNA, ProtozoanEchinococcus granulosusEchinococcus multilocularisFatty Acid-Binding ProteinsFatty AcidsGenome, ProtozoanSequence AnalysisSequence Analysis, DNATranscriptomeDNA, ProtozoanFatty Acid-Binding ProteinsFatty AcidsCestodesEchinococcus multilocularisFABPsFatty acids

Identifiers

PMID32130486
OpenAlexW3010638176

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.