Evidence map›Paper›PMID 32127462›Full record

ArticlemBio2020

Using Colonization Assays and Comparative Genomics To Discover Symbiosis Behaviors and Factors in Vibrio fischeri.

Clotilde Bongrand, Silvia Moriano-Gutierrez, Philip Arevalo, Margaret McFall-Ngai, Karen L Visick, Martin Polz, Edward G Ruby

Open access · goldAbstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. A single point mutation is sufficient to driveJournal of bacteriology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Genetic innovations in animal-microbe symbioses.Nature reviews. Genetics · 2022
    Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Clotilde BongrandUniversity of Hawaii-Manoa, Honolulu, Hawaii, USA.
Silvia Moriano-GutierrezUniversity of Hawaii-Manoa, Honolulu, Hawaii, USA.
Philip ArevaloDepartment of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Margaret McFall-NgaiUniversity of Hawaii-Manoa, Honolulu, Hawaii, USA.
Karen L VisickDepartment of Microbiology and Immunology, Loyola University Chicago, Maywood, Illinois, USA.ORCID 0000-0002-2400-2591
Martin PolzDepartment of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Edward G RubyUniversity of Hawaii-Manoa, Honolulu, Hawaii, USA eruby@hawaii.edu.
University of Hawaiʻi at Mānoa · USMassachusetts Institute of Technology · USLoyola University Chicago · US

Funding

Vibrio fischeri as a Model for Bacterial ColonizationR37AI050661 · NIAID · UNIVERSITY OF HAWAII AT MANOA · PI MARGARET J MC FALL-NGAI, Edward G Ruby · 2018 to 2026
$5.4M
Vibrio fischeri as a model of Bacterial ColonizationR01AI050661 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI MC FALL-NGAI, MARGARET J, RUBY, EDWARD G · 2002 to 2016
$5.0M
Vibrio Virulence Determinants in a Benign ColonizationR01OD011024 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI MC FALL-NGAI, MARGARET J, RUBY, EDWARD G · 2012 to 2020
$3.9M
Host-associated biofilm formation and dispersal mechanismsR35GM130355 · NIGMS · LOYOLA UNIVERSITY CHICAGO · PI Karen L Visick · 2019 to 2026
$3.5M
Vibrio colonization determinants in symbiosisR01GM135254 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI MC FALL-NGAI, MARGARET J, RUBY, EDWARD G · 2020 to 2023
$1.9M
Dynamics and control over host-associated biofilm formation and dispersalR01GM114288 · NIGMS · LOYOLA UNIVERSITY CHICAGO · PI VISICK, KAREN L · 2015 to 2018
$1.2M
NIAID NIH HHS R01 AI050661NIAID NIH HHS R37 AI050661NIGMS NIH HHS R01 GM114288NIGMS NIH HHS R01 GM135254NIGMS NIH HHS R35 GM130355NIH HHS R01 OD011024
6 · The paper itself

Abstract

The luminous marine Gram-negative bacterium

Indexed as

Genome, BacterialGenomicsSymbiosisAliivibrio fischeriAliivibrio InfectionsAnimalsDecapodiformesFish DiseasesHost-Pathogen InteractionsHumansPhylogenyPhylogeographyVirulenceAliivibriodominancegenome analysisgenomesintraspecificsymbiosisVibrio (Aliivibrio) fischeriVibrio fischeri

Identifiers

PMID32127462
PMCPMC7064787
OpenAlexW3006843706

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.