Evidence map›Paper›PMID 32127448›Full record

ArticlemBio2020

Direct Observation of the Dynamics of Single-Cell Metabolic Activity during Microbial Diauxic Growth.

H L O McClelland, C Jones, L M Chubiz, D A Fike, A S Bradley

Open access · goldAbstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Comparative Genomic Analysis of aInternational journal of molecular sciences · 2023
    Article
  5. Single-cell Raman spectroscopy identifiesFrontiers in microbiology · 2022
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

H L O McClellandDepartment of Earth and Planetary Sciences, Washington University, St. Louis, Missouri, USA hmcclelland@unimelb.edu.au.ORCID 0000-0001-5281-6915
C JonesDepartment of Earth and Planetary Sciences, Washington University, St. Louis, Missouri, USA.
L M ChubizDepartment of Biology, University of Missouri, St. Louis, Missouri, USA.ORCID 0000-0003-3370-1308
D A FikeDepartment of Earth and Planetary Sciences, Washington University, St. Louis, Missouri, USA.
A S BradleyDepartment of Earth and Planetary Sciences, Washington University, St. Louis, Missouri, USA.ORCID 0000-0002-4044-2802
Washington University in St. Louis · USThe University of Melbourne · AUUniversity of Missouri–St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Population-level analyses are rapidly becoming inadequate to answer many of biomedical science and microbial ecology's most pressing questions. The role of microbial populations within ecosystems and the evolutionary selective pressure on individuals depend fundamentally on the metabolic activity of single cells. Yet, many existing single-cell technologies provide only indirect evidence of metabolic specialization because they rely on correlations between transcription and phenotype established at the level of the population to infer activity. In this study, we take a top-down approach using isotope labels and secondary ion mass spectrometry to track the uptake of carbon and nitrogen atoms from different sources into biomass and directly observe dynamic changes in anabolic specialization at the level of single cells. We investigate the classic microbiological phenomenon of diauxic growth at the single-cell level in the model methylotroph

Indexed as

BiomassCarbonIsotope LabelingMethylobacterium extorquensNitrogenPhenotypeSingle-Cell AnalysisSpectrometry, Mass, Secondary IonCarbonNitrogencarbon metabolismdiauxic growthmethylotrophypersister cellsSIMSsingle cell

Identifiers

PMID32127448
PMCPMC7064762
OpenAlexW3008865155

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.