Evidence map›Paper›PMID 32127385›Full record

ArticleRNA (New York, N.Y.)2020

Transitions between the steps of forward and reverse splicing of group IIC introns.

Claire M Smathers, Aaron R Robart

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Claire M SmathersDepartment of Biochemistry, West Virginia University, Morgantown, West Virginia 20506, USA.
Aaron R RobartDepartment of Biochemistry, West Virginia University, Morgantown, West Virginia 20506, USA.ORCID 0000-0002-0518-3972
West Virginia University · US

Funding

Mechanisms of Splicing and RetrotranspositionR01GM133857 · NIGMS · WEST VIRGINIA UNIVERSITY · PI ROBART, AARON REIGH · 2019 to 2023
$1.6M
NIGMS NIH HHS R01 GM133857
6 · The paper itself

Abstract

Group II introns are mobile genetic elements that perform both self-splicing and intron mobility reactions. These ribozymes are comprised of a catalytic RNA core that binds to an intron-encoded protein (IEP) to form a ribonucleoprotein (RNP) complex. Splicing proceeds through two competing reactions: hydrolysis or branching. Group IIC intron ribozymes have a minimal RNA architecture, and splice almost exclusively through hydrolysis in ribozyme reactions. Addition of the IEP allows the splicing reaction to form branched lariat RNPs capable of intron mobility. Here we examine ribozyme splicing, IEP-dependent splicing, and mobility reactions of a group IIC intron from the thermophilic bacterium

Indexed as

ExonsInterspersed Repetitive SequencesIntronsMutationNucleic Acid ConformationRibonucleoproteinsRNARNA, CatalyticRNA SplicingRibonucleoproteinsRNARNA, Catalyticintronretrotranspositionribozymesplicing

Identifiers

PMID32127385
PMCPMC7161350
OpenAlexW3009396894

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.