Evidence map›Paper›PMID 32125678›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2020

Evaluation of two multiplex RT-PCR assays for detection and subtype differentiation of Brazilian swine influenza viruses.

Vanessa Haach, Danielle Gava, Maurício Egídio Cantão, Rejane Schaefer

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review of genome sequencing technologies in molecular characterization of influenza A viruses in swine.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2022
    Article
  7. Swine influenza A virus subtypes circulating in Brazilian commercial pig herds from 2012 to 2019.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Vanessa HaachLaboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Rua Sarmento Leite, 500, Porto Alegre, Rio Grande do Sul, CEP 90050-170, Brazil.
Danielle GavaEmbrapa Suínos e Aves, BR-153, Km 110, Distrito de Tamanduá, Concórdia, Santa Catarina, CEP 89715-899, Brazil.
Maurício Egídio CantãoEmbrapa Suínos e Aves, BR-153, Km 110, Distrito de Tamanduá, Concórdia, Santa Catarina, CEP 89715-899, Brazil.
Rejane SchaeferEmbrapa Suínos e Aves, BR-153, Km 110, Distrito de Tamanduá, Concórdia, Santa Catarina, CEP 89715-899, Brazil. rejane.schaefer@embrapa.br.ORCID http://orcid.org/0000-0002-3511-0221
Brazilian Agricultural Research Corporation · BRUniversidade Federal do Rio Grande do Sul · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico (BR) 131105/2017-5Empresa Brasileira de Pesquisa Agropecuária 22.16.05.004.00.03
6 · The paper itself

Abstract

Influenza A virus (IAV) subtypes H1N1, H1N2, and H3N2 are endemic in swine herds in most pork producing countries; however, the viruses circulating in different geographic regions are antigenically and genetically distinct. In this sense, the availability of a rapid diagnostic assay to detect locally adapted IAVs and discriminate the virus subtype in clinical samples from swine is extremely important for monitoring and control of the disease. This study describes the development and validation of a multiplex RT-PCR assay for detection and subtyping of IAV from pigs. The analytical and diagnostic specificity of the assays was 100% (94.3-100.0, CI 95%), and the limit of detection was 10

Indexed as

AnimalsBrazilInfluenza A Virus, H1N1 SubtypeInfluenza A Virus, H1N2 SubtypeInfluenza A Virus, H3N2 SubtypeMultiplex Polymerase Chain ReactionOrthomyxoviridae InfectionsPhylogenyReverse Transcriptase Polymerase Chain ReactionSwineSwine DiseasesDiagnosisInfluenza A virusMultiplex RT-PCRSubtypingSwine

Identifiers

PMID32125678
PMCPMC7455636
OpenAlexW3010499314

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.