Evidence map›Paper›PMID 32124485›Full record

ArticleMycoses2020

Fluconazole-resistant Candida parapsilosis strains with a Y132F substitution in the ERG11 gene causing invasive infections in a neonatal unit, South Africa.

Rindidzani E Magobo, Shawn R Lockhart, Nelesh P Govender

Abstract read
In one paragraph

Article in Mycoses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Species-specific antifungal resistance trends in yeast bloodstream isolates causing candidemia before, during, and after the COVID-19 pandemic: insights from the INVIFAR Mexican multicenter network.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  5. Article
  6. Article
  7. Six-month surveillance ofFrontiers in cellular and infection microbiology · 2026
    Article
  8. Review
  9. Review
  10. Observational
  11. Article
  12. Clinical impact of fluconazole-resistantFuture microbiology · 2025
    Review
  13. Article
  14. Bixin fromACS omega · 2025
    Article
  15. Review
  16. Article
  17. Resistance to Azoles inJournal of fungi (Basel, Switzerland) · 2025
    Article
  18. Article
  19. Clinical Characteristics of Candidemia Due toJournal of fungi (Basel, Switzerland) · 2024
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Rindidzani E MagoboCentre for Healthcare-Associated Infections, Antimicrobial Resistance and Mycoses, A Division of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg, South Africa.ORCID https://orcid.org/0000-0002-0950-0146
Shawn R LockhartMycotic Diseases Branch, Centers for Disease Control and Prevention, Atlanta, GA, USA.
Nelesh P GovenderCentre for Healthcare-Associated Infections, Antimicrobial Resistance and Mycoses, A Division of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg, South Africa.ORCID https://orcid.org/0000-0001-7869-9462
National Health Laboratory Service · ZACenters for Disease Control and Prevention · US

Funding

Intramural CDC HHS CC999999PfizerWellcome Trust 99302
6 · The paper itself

Abstract

introductionThe prevalence of azole resistance in C parapsilosis is very low in most parts of the world. However, South Africa has reported an exceptionally high prevalence of azole resistance in C parapsilosis strains isolated from candidaemia cases. We aimed to determine the possible molecular mechanisms of fluconazole resistance in C parapsilosis isolates obtained through surveillance at a large neonatal unit at a South African academic hospital.

methodsWe sequenced the ERG11 and MRR1 genes of C parapsilosis isolates recovered from cases of neonatal candidemia, followed by microsatellite genotyping. A total of 73 isolates with antifungal susceptibility results were analysed.

resultsOf these, 57 (78%) were resistant, 11 (15%) susceptible dose-dependent and 5 (7%) susceptible. The most commonly identified amino acid substitution within the ERG11 gene was Y132F in 68% (39/57) of fluconazole-resistant isolates and none in susceptible isolates. Three amino acid substitutions (R405K, G583R and A619V) and 1 nucleotide deletion at position 1331 were identified within MRR1 gene in 19 (26%) isolates. Microsatellite genotyping grouped isolates into four clusters (50 isolates). Cluster 1 accounted for 23% (17/73) of all cases, cluster 2 for 22% (16/73), cluster 3 for 14% (10/73) and cluster 4 for 10% (7/73). We found an association between cluster type and fluconazole resistance (P-value = .004). Isolates harbouring the Y132F substitution were more likely to belong to a cluster than non-Y132F isolates.

conclusionFluconazole resistance in C parapsilosis strains from a single South African neonatal unit was associated with cluster type and predominantly driven by Y123F amino acid substitutions in the ERG11 gene.

Indexed as

Academic Medical CentersAmino Acid SubstitutionAzolesCandida parapsilosisCandidemiaDrug Resistance, FungalFluconazoleFungal ProteinsGenotypeHumansInfantInfant, NewbornMicrobial Sensitivity TestsMicrosatellite RepeatsNurseries, HospitalSouth AfricaAzolesFluconazoleFungal ProteinsCandida parapsilosiscandidemiaERG11fluconazole resistanceMRR1South Africa

Identifiers

PMID32124485
PMCPMC11973574
OpenAlexW3010037211

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.