Evidence map›Paper›PMID 32124178›Full record

ArticlePlant molecular biology2020

Antagonistic regulation of axillary bud outgrowth by the BRANCHED genes in tobacco.

Na Ding, Qiulin Qin, Xia Wu, Robert Miller, David Zaitlin, Dandan Li, Shengming Yang

Abstract read
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In one paragraph

Article in Plant molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Na DingDepartment of Plant & Soil Sciences, University of Kentucky, Lexington, KY, 40546, USA.
Qiulin QinDepartment of Plant & Soil Sciences, University of Kentucky, Lexington, KY, 40546, USA.
Xia WuDepartment of Plant & Soil Sciences, University of Kentucky, Lexington, KY, 40546, USA.
Robert MillerDepartment of Plant & Soil Sciences, University of Kentucky, Lexington, KY, 40546, USA.
David ZaitlinKentucky Tobacco Research & Development Center, University of Kentucky, Lexington, KY, 40546, USA.
Dandan LiDepartment of Plant & Soil Sciences, University of Kentucky, Lexington, KY, 40546, USA.
Shengming YangDepartment of Plant & Soil Sciences, University of Kentucky, Lexington, KY, 40546, USA. Shengming.Yang@usda.gov.ORCID http://orcid.org/0000-0002-4558-8448

Funding

Council for Burley Tobacco Gift fundingKentucky Tobacco Research and Development Center GrantR.J. Reynolds Tobacco Company Gift funding
6 · The paper itself

Abstract

As a key integrator of shoot branching, BRANCHED 1 (BRC1) coordinates and is orchestrated by endogenous and environmental signals involved in the regulation of axillary bud outgrowth. In the present study, we characterized the regulatory roles of five BRC gene members in tobacco (Nicotiana tabacum L.) using CRISPR site-directed mutagenesis and overexpression assays. It was shown that lateral branching was negatively regulated by NtBRC1A-1, 1B-1, and 1B-2, but was unexpectedly promoted by NtBRC2A. Suppression of bud growth may be attained by direct binding of NtBRCs to the Tassels Replace Upper Ears 1 (TRU1) genes. It was speculated that NtBRC2A probably confers a dominant negative effect by interfering with the branching-inhibitory BRC1 genes. Our results suggested that highly homologous gene family members may function antagonistically in the same signaling pathway. However, the molecular mechanism underlying NtBRC2A-mediated outgrowth of axillary buds needs to be further addressed. KEY MESSAGE: Axillary bud outgrowth in general is negatively regulated by the BRANCHED gene. Here we show that the BRANCHED genes play opposing regulatory roles in tobacco lateral branching.

Indexed as

Genes, PlantCRISPR-Cas SystemsDown-RegulationGene Expression Regulation, PlantNicotianaPhylogenyPlant DevelopmentRNA InterferenceSignal TransductionTranscriptomeUp-RegulationBRANCHED 1CRISPRDominant negativeLateral branching

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.