Evidence map›Paper›PMID 32123957›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2020

Fine mapping of leaf rust resistance gene Rph13 from wild barley.

Matthias Jost, Davinder Singh, Evans Lagudah, Robert F Park, Peter Dracatos

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. High-resolution mapping of Ryd4TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. A novel locus conferring resistance toFrontiers in plant science · 2022
    Article
  7. Discovery and fine mapping of Rph28: a new gene conferring resistance to Puccinia hordei from wild barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  8. Fine Mapping of the Leaf Rust Resistance GeneFrontiers in plant science · 2021
    Article
  9. A durum wheat adult plant stripe rust resistance QTL and its relationship with the bread wheat Yr80 locus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Matthias JostCSIRO Agriculture and Food, Commonwealth Scientific and Industrial Research Organisation, GPO Box 1700, Canberra, ACT, 2601, Australia.
Davinder SinghPlant Breeding Institute, The University of Sydney, Cobbitty, NSW, 2570, Australia.
Evans LagudahCSIRO Agriculture and Food, Commonwealth Scientific and Industrial Research Organisation, GPO Box 1700, Canberra, ACT, 2601, Australia.
Robert F ParkPlant Breeding Institute, The University of Sydney, Cobbitty, NSW, 2570, Australia.
Peter DracatosPlant Breeding Institute, The University of Sydney, Cobbitty, NSW, 2570, Australia. peter.dracatos@sydney.edu.au.ORCID http://orcid.org/0000-0002-4199-7359
The University of Sydney · AUCommonwealth Scientific and Industrial Research Organisation · AU

Funding

Grains Research and Development Corporation US0074
6 · The paper itself

Abstract

key messageFine mapping of the barley leaf rust resistance locus Rph13 on chromosome 3HL facilitates its use in breeding programs through marker-assisted selection. Barley leaf rust (BLR-caused by Puccinia hordei) is a widespread fungal disease that can be effectively controlled by genetic resistance. There is an ongoing need to both diversify and genetically characterise resistance loci to provide effective and durable control given the ongoing threat of rapidly evolving P. hordei populations. Here, we report on the molecular genetic characterisation of the Rph13 locus, originally derived from wild barley and transferred to barley accession Berac (then referred to as PI 531849). The 2017 reference genome of cv. Morex was used as a road map to rapidly narrow both a genetic and physical intervals around the Rph13 resistance locus. Using recombination-based mapping, we narrowed the physical interval to 116.6 kb on chromosome 3H in a segregating population of a cross of the Rph13 carrying resistant line PI 531849 with the leaf rust-susceptible cultivar Gus. We identified two nucleotide-binding leucine-rich repeat genes as likely candidates for the Rph13 resistance. Sequences from the candidate genes enabled the development of a KASP marker that distinguished resistant and susceptible progeny and was found to be predictive and useful for MAS.

Indexed as

BasidiomycotaChromosome MappingChromosomes, PlantDisease ResistanceGenes, PlantGenetic MarkersGenotypeHordeumLikelihood FunctionsModels, GeneticPhenotypePhylogenyPlant BreedingPlant DiseasesQuantitative Trait LociGenetic Markers

Identifiers

PMID32123957
OpenAlexW3009101809

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.