Evidence map›Paper›PMID 32123902›Full record

ArticleNucleic acids research2020

The acute myeloid leukemia variant DNMT3A Arg882His is a DNMT3B-like enzyme.

Allison B Norvil, Lama AlAbdi, Bigang Liu, Yu Han Tu, Nicole E Forstoffer, Amie R Michie, Taiping Chen, Humaira Gowher

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Multidomain interaction governs the filamentous assembly of the dominant-negative DNMT3A R882H mutant.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Enzymology of Mammalian DNA Methyltransferases.Advances in experimental medicine and biology · 2022
    Article
  11. Genetic Studies on Mammalian DNA Methyltransferases.Advances in experimental medicine and biology · 2022
    Article
  12. Review
  13. Article
  14. Alterations toCancer research · 2021
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Allison B NorvilDepartment of Biochemistry, Purdue University, West Lafayette, IN 47907, USA.
Lama AlAbdiDepartment of Biochemistry, Purdue University, West Lafayette, IN 47907, USA.
Bigang LiuDepartment of Epigenetics and Molecular Carcinogenesis, Division of Basic Sciences, The University of Texas MD Anderson Cancer Center, Smithville, TX 78957, USA.
Yu Han TuDepartment of Biochemistry, Purdue University, West Lafayette, IN 47907, USA.
Nicole E ForstofferDepartment of Biochemistry, Purdue University, West Lafayette, IN 47907, USA.
Amie R MichieDepartment of Biochemistry, Purdue University, West Lafayette, IN 47907, USA.
Taiping ChenDepartment of Epigenetics and Molecular Carcinogenesis, Division of Basic Sciences, The University of Texas MD Anderson Cancer Center, Smithville, TX 78957, USA.
Humaira GowherDepartment of Biochemistry, Purdue University, West Lafayette, IN 47907, USA.
Purdue University West Lafayette · USThe University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Modeling ICF syndrome in mice: Role of Zbtb24 in DNA methylation and antibody productionR01AI121403 · NIAID · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CHEN, TAIPING · 2016 to 2020
$2.0M
Regulation of Dnmt3 Activity at Enhancers of Cell Identity Genes During DifferentiationR01GM118654 · NIGMS · PURDUE UNIVERSITY · PI GOWHER, HUMAIRA · 2017 to 2021
$1.6M
NCI NIH HHS P30 CA016672NIAID NIH HHS R01 AI121403NIGMS NIH HHS R01 GM118654
6 · The paper itself

Abstract

We have previously shown that the highly prevalent acute myeloid leukemia (AML) mutation, Arg882His, in DNMT3A disrupts its cooperative mechanism and leads to reduced enzymatic activity, thus explaining the genomic hypomethylation in AML cells. However, the underlying cause of the oncogenic effect of Arg882His in DNMT3A is not fully understood. Here, we discovered that DNMT3A WT enzyme under conditions that favor non-cooperative kinetic mechanism as well as DNMT3A Arg882His variant acquire CpG flanking sequence preference akin to that of DNMT3B, which is non-cooperative. We tested if DNMT3A Arg882His could preferably methylate DNMT3B-specific target sites in vivo. Rescue experiments in Dnmt3a/3b double knockout mouse embryonic stem cells show that the corresponding Arg878His mutation in mouse DNMT3A severely impairs its ability to methylate major satellite DNA, a DNMT3A-preferred target, but has no overt effect on the ability to methylate minor satellite DNA, a DNMT3B-preferred target. We also observed a previously unappreciated CpG flanking sequence bias in major and minor satellite repeats that is consistent with DNMT3A and DNMT3B specificity suggesting that DNA methylation patterns are guided by the sequence preference of these enzymes. We speculate that aberrant methylation of DNMT3B target sites could contribute to the oncogenic potential of DNMT3A AML variant.

Indexed as

Amino Acid SubstitutionAnimalsArginineCpG IslandsDNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3ADNA Methyltransferase 3BDNA, SatelliteEmbryonic Stem CellsHumansKineticsLeukemia, Myeloid, AcuteMiceMutationMyeloid Ecotropic Viral Integration Site 1 ProteinArginineDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3ADNA Methyltransferase 3BDNA, SatelliteDNMT3A protein, humanDnmt3a protein, mouseMyeloid Ecotropic Viral Integration Site 1 Protein

Identifiers

PMID32123902
PMCPMC7144950
OpenAlexW3009297019

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.