Evidence map›Paper›PMID 32123521›Full record

ArticleProteome science2020

Comparative proteomic analysis of the brain and colon in three rat models of irritable bowel syndrome.

Beihua Zhang, Hong Xue, Wei Wang, Ting Chen, Min Su, Nan Kang, Jianqin Yang, Zhaoxiang Bian, Fengyun Wang, Xudong Tang

Open access · goldAbstract read
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Article in Proteome science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Beihua Zhang *1Department of Gastrointestinal Medicine, Xiyuan Hospital China Academy of Traditional Chinese Medical Sciences, Beijing, 100091 China.
Hong Xue *1Department of Gastrointestinal Medicine, Xiyuan Hospital China Academy of Traditional Chinese Medical Sciences, Beijing, 100091 China.
Wei Wang1Department of Gastrointestinal Medicine, Xiyuan Hospital China Academy of Traditional Chinese Medical Sciences, Beijing, 100091 China.
Ting Chen1Department of Gastrointestinal Medicine, Xiyuan Hospital China Academy of Traditional Chinese Medical Sciences, Beijing, 100091 China.
Min Su1Department of Gastrointestinal Medicine, Xiyuan Hospital China Academy of Traditional Chinese Medical Sciences, Beijing, 100091 China.
Nan Kang2Department of Gastrointestinal Medicine, Affiliated Hospital of Jining Medical University, Jining, Shandong China.
Jianqin Yang3Department of Gastrointestinal Medicine, Wangjing Hospital, China Academy of Chinese Medical Sciences, Beijing, China.
Zhaoxiang Bian4Chinese Medicine Clinical Study Center, Jockey Club School of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong SAR China.
Fengyun Wang1Department of Gastrointestinal Medicine, Xiyuan Hospital China Academy of Traditional Chinese Medical Sciences, Beijing, 100091 China.
Xudong Tang1Department of Gastrointestinal Medicine, Xiyuan Hospital China Academy of Traditional Chinese Medical Sciences, Beijing, 100091 China.
Xiyuan Hospital · CNAffiliated Hospital of Jining Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNHong Kong Baptist University · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIrritable bowel syndrome (IBS) has been gradually recognized as a disorder of the brain-gut interaction, but the molecular changes in the brain and colon that occur in disease development remain poorly understood. We employed proteomic analysis to identify differentially expressed proteins in both the brain and colon of three IBS models.

methodsTo explore the relevant protein abundance changes in the brain and colon, isobaric tags for relative and absolute quantitation (iTRAQ), liquid chromatography and tandem mass spectrometry (LC-MS) and Western blotting methods were used in three IBS models, including maternal separation (MS, group B), chronic wrap restraint stress (CWRS, group C) and a combination of MS and CWRS (group D).

resultsWe identified 153, 280, and 239 proteins that were common and differentially expressed in the two tissue types of groups B, C and D, respectively; 43 differentially expressed proteins showed the same expression changes among the three groups, including 25 proteins upregulated in the colon and downregulated in the brain, 7 proteins downregulated in the colon and upregulated in the brain, and 3 proteins upregulated and 8 downregulated in both tissues. Gene ontology analysis showed that the differentially expressed proteins were mainly associated with cellular assembly and organization and cellular function and maintenance. Protein interaction network and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that the differentiated proteins were mainly involved in the protein ubiquitination pathway and mitochondrial dysfunction.

conclusionsTaken together, the data presented represent a comprehensive and quantitative proteomic analysis of the brain and colon in IBS models, providing new evidence of an abnormal brain-gut interaction in IBS. These data may be useful for further investigation of potential targets in the diagnosis and treatment of IBS.

Indexed as

BrainColonIrritable bowel syndrome modelsProteomics

Identifiers

PMID32123521
PMCPMC7041085
OpenAlexW3012662821

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.