Evidence map›Paper›PMID 32123020›Full record

ArticleCold Spring Harbor protocols2020

Genomics Methods for

Michael J Gilchrist, Ken W Y Cho, Gert Jan C Veenstra

Abstract read
In one paragraph

Article in Cold Spring Harbor protocols, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Michael J GilchristThe Francis Crick Institute, London NW1 1AT, United Kingdom; drmikegilchrist@gmail.com kwcho@uci.edu g.veenstra@science.ru.nl.ORCID 0000-0001-9762-1951
Ken W Y ChoDepartment of Developmental and Cell Biology, University of California, Irvine, California 92697; drmikegilchrist@gmail.com kwcho@uci.edu g.veenstra@science.ru.nl.
Gert Jan C VeenstraRadboud University, Department of Molecular Developmental Biology, 6525GA Nijmegen, The Netherlands drmikegilchrist@gmail.com kwcho@uci.edu g.veenstra@science.ru.nl.ORCID 0000-0002-7787-4940

Funding

Zygotic Genome Activation by Maternal Transcription Factors and Epigenetic ModifiersR35GM139617 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Ken W.Y. Cho · 2021 to 2026
$2.6M
Mechanisms of Foxh1 pioneer factor action during mesendoderm developmentR01GM126395 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CHO, KEN W.Y. · 2017 to 2020
$1.6M
NIGMS NIH HHS R01 GM126395NIGMS NIH HHS R35 GM139617
6 · The paper itself

Abstract

High-throughput sequencing methods have created exciting opportunities to explore the regulatory landscape of the entire genome. Here we introduce methods to characterize the genomic locations of bound proteins, open chromatin, and sites of DNA-DNA contact in

Indexed as

AnimalsChromatinChromatin ImmunoprecipitationDNAEmbryo, NonmammalianGenomeGenomicsHigh-Throughput Nucleotide SequencingXenopusChromatinDNA

Identifiers

PMID32123020
PMCPMC7337993

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.