Evidence map›Paper›PMID 32122372›Full record

ArticleMolecular neurodegeneration2020

Utilizing minimally purified secreted rAAV for rapid and cost-effective manipulation of gene expression in the CNS.

Marshall S Goodwin, Cara L Croft, Hunter S Futch, Daniel Ryu, Carolina Ceballos-Diaz, Xuefei Liu, Giavanna Paterno, Catalina Mejia, Doris Deng, Kimberly Menezes and 11 more

Open access · goldAbstract read
In one paragraph

Article in Molecular neurodegeneration, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 18 citations in OpenAlex.

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  17. Tauopathies: Deciphering Disease Mechanisms to Develop Effective Therapies.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 1 institution in 1 country.

Marshall S GoodwinDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Cara L CroftDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Hunter S FutchDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Daniel RyuDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Carolina Ceballos-DiazDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Xuefei LiuDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Giavanna PaternoDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Catalina MejiaDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Doris DengDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Kimberly MenezesDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Laura LondonoDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Kefren ArjonaDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Mary ParianosDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Van TruongDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Eva RostonicsDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Amanda HernandezDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Sanford L BoyeDepartment of Pediatrics and the Powell Gene Therapy Center, University of Florida, Gainesville, Florida, USA.
Shannon E BoyeDepartment of Ophthalmology, University of Florida, Gainesville, Florida, USA.
Yona LevitesDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA.
Pedro E CruzDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA. pecruz68@ufl.edu.
Todd E GoldeDepartment of Neuroscience, College of Medicine, University of Florida, Gainesville, Florida, USA. tgolde@ufl.edu.ORCID 0000-0003-1867-7071
University of Florida · US

Funding

Integrating the exposome and methylome to inform brain molecular changes in ADRD across established diverse cohorts.U01AG046139 · NIA · UNIVERSITY OF FLORIDA · PI ERTEKIN-TANER, NILUFER, PETERS, METTE · 2013 to 2022
$24.6M
Engineering AAV for safe and efficient gene delivery to the human retinaR01EY024280 · NEI · UNIVERSITY OF FLORIDA · PI Shannon Elizabeth Boye · 2014 to 2026
$7.5M
NEI NIH HHS R01 EY024280NIA NIH HHS U01 AG046139
6 · The paper itself

Abstract

backgroundRecombinant adeno-associated virus (rAAV) is widely used in the neuroscience field to manipulate gene expression in the nervous system. However, a limitation to the use of rAAV vectors is the time and expense needed to produce them. To overcome this limitation, we evaluated whether unpurified rAAV vectors secreted into the media following scalable PEI transfection of HEK293T cells can be used in lieu of purified rAAV.

methodsWe packaged rAAV2-EGFP vectors in 30 different wild-type and mutant capsids and subsequently collected the media containing secreted rAAV. Genomic titers of each rAAV vector were assessed and the ability of each unpurified virus to transduce primary mixed neuroglial cultures (PNGCs), organotypic brain slice cultures (BSCs) and the mouse brain was evaluated.

resultsThere was ~ 40-fold wide variance in the average genomic titers of the rAAV2-EGFP vector packaged in the 30 different capsids, ranging from a low ~ 4.7 × 10

conclusionsUnpurified rAAV vectors secreted into the media can efficiently transduce brain cells in vitro and in vivo, providing a cost-effective way to manipulate gene expression. The use of unpurified virus will greatly reduce costs of exploratory studies and further increase the utility of rAAV vectors for standard laboratory use.

Indexed as

DependovirusGene ExpressionGenetic VectorsGene Transfer TechniquesAnimalsBrainGenetic TherapyGreen Fluorescent ProteinsHEK293 CellsHumansMiceNeurogliaNeuronsTransduction, Geneticenhanced green fluorescent proteinGreen Fluorescent ProteinsAAV productionAdeno-associated virusCapsid pseudo-typeCentral nervous systemGene delivery

Identifiers

PMID32122372
PMCPMC7053119
OpenAlexW3011363894

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.