Evidence map›Paper›PMID 32122327›Full record

ArticleBMC medical genetics2020

Identification of differentially expressed miRNAs and mRNAs in synovial of osteoarthritis via RNA-sequencing.

Yu Zhou, Zhicong Wang, Xi Chen, Jianjun Zhang, Ling Yang, Shuping Liu, Yuehong Liu

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  4. Utilizing Public Molecular Biological Databases for CCN Family Research.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
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  9. Review
  10. Article
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  12. Article
  13. Crosstalk Among circRNA/lncRNA, miRNA, and mRNA in Osteoarthritis.Frontiers in cell and developmental biology · 2021
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yu ZhouDepartment of Orthopedics, People's Hospital of Deyang City, No. 173, Taishan North Road, Jingyang District, Deyang, 618000, Sichuan, China.
Zhicong WangDepartment of Orthopedics, People's Hospital of Deyang City, No. 173, Taishan North Road, Jingyang District, Deyang, 618000, Sichuan, China.
Xi ChenDepartment of Orthopedics, People's Hospital of Deyang City, No. 173, Taishan North Road, Jingyang District, Deyang, 618000, Sichuan, China. cxchenxi007@163.com.
Jianjun ZhangDepartment of Orthopedics, People's Hospital of Deyang City, No. 173, Taishan North Road, Jingyang District, Deyang, 618000, Sichuan, China.
Ling YangDepartment of Orthopedics, People's Hospital of Deyang City, No. 173, Taishan North Road, Jingyang District, Deyang, 618000, Sichuan, China.
Shuping LiuDepartment of Orthopedics, People's Hospital of Deyang City, No. 173, Taishan North Road, Jingyang District, Deyang, 618000, Sichuan, China.
Yuehong LiuDepartment of Orthopedics, People's Hospital of Deyang City, No. 173, Taishan North Road, Jingyang District, Deyang, 618000, Sichuan, China. liuyuehong_doctor@163.com.ORCID 0000-0002-7344-090X
Deyang Stomatological Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOsteoarthritis (OA) is the most common form of arthritis and a leading cause of disability. This study attempted to investigate the key mRNAs and miRNAs related to OA. PATIENTS AND

methodsFrom April 17th, 2018 to May 17th, 2018, five patients with OA and three normal controls were enrolled in this present study. To identify the differentially expressed mRNAs (DEmRNAs) and miRNAs (DEmiRNAs) between patients with OA and normal controls, RNA-sequencing was performed. Then, DEmiRNA-target DEmRNAs analysis and functional annotation of DEmiRNA-target DEmRNAs were performed. To validate the RNA-sequencing results, quantitative real time-PCR (RT-PCR) and western blot analysis were performed as well.

resultsA total of 1068 DEmRNAs, 21 DEmiRNAs and 395 DEmiRNA-DEmRNA pairs were identified in synovial tissues of patients with OA. The functional annotation of DEmiRNA-target DEmRNAs revealed that Pathways in cancer and PI3K-Akt signaling pathway were significantly enriched Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. QRT-PCR and western blot results revealed that except for TLR7, the expression level of the others was consistent with the RNA-sequencing results, generally.

conclusionThe findings of this present study may provide new clues for the roles of DEmRNAs and DEmiRNAs in the pathogenesis of OA.

Indexed as

Case-Control StudiesDisease ProgressionExome SequencingGene Expression ProfilingGene Expression RegulationHumansMicroRNAsOsteoarthritisRNA, MessengerSequence Analysis, RNASynovial MembraneMicroRNAsRNA, MessengerFunctional annotationmiRNAmRNAOsteoarthritis (OA)RNA-sequencing

Identifiers

PMID32122327
PMCPMC7053084
OpenAlexW3012101979

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.