Evidence map›Paper›PMID 32121243›Full record

ArticleInternational journal of molecular sciences2020

Novel Genetically Encoded Bright Positive Calcium Indicator NCaMP7 Based on the mNeonGreen Fluorescent Protein.

Oksana M Subach, Vladimir P Sotskov, Viktor V Plusnin, Anna M Gruzdeva, Natalia V Barykina, Olga I Ivashkina, Konstantin V Anokhin, Alena Y Nikolaeva, Dmitry A Korzhenevskiy, Anna V Vlaskina and 9 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 67 citations in OpenAlex.

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  17. A blue-shifted genetically encoded CabioRxiv : the preprint server for biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 8 institutions in 3 countries.

Oksana M SubachNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Vladimir P SotskovInstitute for Advanced Brain Studies, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.ORCID 0000-0002-1729-5744
Viktor V PlusninNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Anna M GruzdevaNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Natalia V BarykinaP.K. Anokhin Research Institute of Normal Physiology, Moscow 125315, Russia.ORCID 0000-0001-5835-8388
Olga I IvashkinaNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Konstantin V AnokhinInstitute for Advanced Brain Studies, M.V. Lomonosov Moscow State University, Moscow 119991, Russia.
Alena Y NikolaevaNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Dmitry A KorzhenevskiyNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Anna V VlaskinaNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Vladimir A LazarenkoNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Konstantin M BoykoBach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences, Moscow 119071, Russia.
Tatiana V RakitinaNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Anna M VarizhukResearch and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow 119435, Russia.
Galina E PozmogovaResearch and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow 119435, Russia.
Oleg V PodgornyM.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, RAS, Moscow 117997, Russia.
Kiryl D PiatkevichMassachusetts Institute of Technology, Cambridge, MA 02139, USA.ORCID 0000-0002-7777-9468
Edward S BoydenMassachusetts Institute of Technology, Cambridge, MA 02139, USA.
Fedor V SubachNational Research Center "Kurchatov Institute", Moscow 123182, Russia.
Kurchatov Institute · RULomonosov Moscow State University · RUFederal Medical-Biological Agency · RUA N Bach Institute of Biochemistry · RUInstitute of Normal Physiology named after P.K. Anokhin · RUMassachusetts Institute of Technology · USPirogov Russian National Research Medical University · RUWestlake University · CN

Funding

Novel Platforms for Systematic Optical Control of Complex Neural Circuits In VivoR01DA029639 · NIDA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S. · 2010 to 2023
$6.7M
High-Performance Imaging Through Scattering Living TissueR01DA045549 · NIDA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S. · 2017 to 2020
$3.5M
internal grant of the National Research Center Kurchatov Institute 1360 of 25.06.2019Ministry of Science and Higher Education of the Russian Federation 075-15-2019-1669Ministry of Science and Higher Education of the Russian Federation 075-15-2019-1789Ministry of Science and Higher Education of the Russian Federation to K.M.B.NIDA NIH HHS R01 DA029639NIDA NIH HHS R01 DA045549NIH HHS 1R01DA045549NIH HHS 1R01GM104948NIH HHS 1R43MH109332NIH HHS 2R01DA029639Russian Science Foundation 16-15-10323the Foundation of Westlake University to K.D.P.the HHMI-Simons Faculty Scholars Program to John DoerrРоссийский Фонд Фундаментальных Исследований (РФФИ) 17-00-00215Российский Фонд Фундаментальных Исследований (РФФИ) 18-34-00640Российский Фонд Фундаментальных Исследований (РФФИ) 19-04-00395Российский Фонд Фундаментальных Исследований (РФФИ) 19-34-70004Российский Фонд Фундаментальных Исследований (РФФИ) 20-015-00427
6 · The paper itself

Abstract

Green fluorescent genetically encoded calcium indicators (GECIs) are the most popular tool for visualization of calcium dynamics in vivo. However, most of them are based on the EGFP protein and have similar molecular brightnesses. The NTnC indicator, which is composed of the mNeonGreen fluorescent protein with the insertion of troponin C, has higher brightness as compared to EGFP-based GECIs, but shows a limited inverted response with an ΔF/F of 1. By insertion of a calmodulin/M13-peptide pair into the mNeonGreen protein, we developed a green GECI called NCaMP7. In vitro, NCaMP7 showed positive response with an ΔF/F of 27 and high affinity (K

Indexed as

Genetic TechniquesAnimalsBehavior, AnimalCalciumCells, CulturedCrystallography, X-RayFluorometryGreen Fluorescent ProteinsHeLa CellsHippocampusHumansIndicators and ReagentsKineticsMice, Inbred C57BLModels, MolecularNeuronsCalciumGreen Fluorescent ProteinsIndicators and Reagentscalcium imagingcrystal structurefluorescent proteingenetically encoded calcium indicator (GECI)high brightnessNCaMP7protein engineering

Identifiers

PMID32121243
PMCPMC7084697
OpenAlexW3009290538

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.