Evidence map›Paper›PMID 32117410›Full record

ArticleFrontiers in genetics2019

Genome-Wide Association Study Uncovers Novel Genomic Regions Associated With Coleoptile Length in Hard Winter Wheat.

Jagdeep Singh Sidhu, Dilkaran Singh, Harsimardeep Singh Gill, Navreet Kaur Brar, Yeyan Qiu, Jyotirmoy Halder, Rami Al Tameemi, Brent Turnipseed, Sunish Kumar Sehgal

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 2 pooled it
6.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 2 syntheses or guidelines pooled it, 37 citations in OpenAlex.

  1. Pooled it
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  9. Impact of "Green Revolution" geneFrontiers in plant science · 2023
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  13. Whole-genome analysis of hard winter wheat germplasm identifies genomic regions associated with spike and kernel traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Jagdeep Singh SidhuDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
Dilkaran SinghDepartment of Biology and Microbiology, South Dakota State University, Brookings, SD, United States.
Harsimardeep Singh GillDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
Navreet Kaur BrarDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
Yeyan QiuDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
Jyotirmoy HalderDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
Rami Al TameemiDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
Brent TurnipseedDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
Sunish Kumar SehgalDepartment of Agronomy, Horticulture & Plant Science, South Dakota State University, Brookings, SD, United States.
South Dakota State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Successful seedling establishment depends on the optimum depth of seed placement especially in drought-prone conditions, providing an opportunity to exploit subsoil water and increase winter survival in winter wheat. Coleoptile length is a key determinant for the appropriate depth at which seed can be sown. Thus, understanding the genetic basis of coleoptile length is necessary and important for wheat breeding. We conducted a genome-wide association study (GWAS) using a diverse panel of 298 winter wheat genotypes to dissect the genetic architecture of coleoptile length. We identified nine genomic regions associated with the coleoptile length on seven different chromosomes. Of the nine genomic regions, five have been previously reported in various studies, including one mapped to previously known

Indexed as

coleoptile lengthgenome-wide association studymarker-assisted selectionquantitative trait locisemi-dwarf wheatSNP (Single-nucleotide polymorphism)Triticum aestivum

Identifiers

PMID32117410
PMCPMC7025573
OpenAlexW3004848694

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.