Evidence map›Paper›PMID 32111210›Full record

ArticleMicrobial cell factories2020

Relative contributions of non-essential Sec pathway components and cell envelope-associated proteases to high-level enzyme secretion by Bacillus subtilis.

Jolanda Neef, Cristina Bongiorni, Brian Schmidt, Vivianne J Goosens, Jan Maarten van Dijl

Open access · goldAbstract readComparative Study
In one paragraph

Article in Microbial cell factories, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
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  7. The Construction of an Environmentally Friendly Super-Secreting Strain ofInternational journal of molecular sciences · 2024
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  13. TerC Proteins Function During Protein Secretion to Metalate Exoenzymes.bioRxiv : the preprint server for biology · 2023
    Article
  14. Article
  15. The multifunctionality of expression systems inExperimental biology and medicine (Maywood, N.J.) · 2021
    Review
  16. Real-Time Messenger RNA Dynamics inFrontiers in microbiology · 2021
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jolanda NeefDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, P.O. Box 30001, 9700 RB, Groningen, The Netherlands.
Cristina BongiorniDuPont Industrial Biosciences, 925 Page Mill Road, Palo Alto, CA, 94304, USA.
Brian SchmidtDuPont Industrial Biosciences, 925 Page Mill Road, Palo Alto, CA, 94304, USA.
Vivianne J GoosensDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, P.O. Box 30001, 9700 RB, Groningen, The Netherlands.
Jan Maarten van DijlDepartment of Medical Microbiology, University of Groningen, University Medical Center Groningen, Hanzeplein 1, P.O. Box 30001, 9700 RB, Groningen, The Netherlands. j.m.van.dijl01@umcg.nl.ORCID http://orcid.org/0000-0002-5688-8438
University Medical Center Groningen · NLDuPont (United States) · US

Funding

DuPont Industrial Biosciences not applicable
6 · The paper itself

Abstract

backgroundBacillus subtilis is an important industrial workhorse applied in the production of many different commercially relevant proteins, especially enzymes. Virtually all of these proteins are secreted via the general secretion (Sec) pathway. Studies from different laboratories have demonstrated essential or non-essential contributions of various Sec machinery components to protein secretion in B. subtilis. However, a systematic comparison of the impact of each individual Sec machinery component under conditions of high-level protein secretion was so far missing.

resultsIn the present study, we have compared the contributions of non-essential Sec pathway components and cell envelope-associated proteases on the secretion efficiency of three proteins expressed at high level. This concerned the α-amylases AmyE from B. subtilis and AmyL from Bacillus licheniformis, and the serine protease BPN' from Bacillus amyloliquefaciens. We compared the secretion capacity of mutant strains in shake flask cultures, and the respective secretion kinetics by pulse-chase labeling experiments. The results show that secDF, secG or rasP mutations severely affect AmyE, AmyL and BPN' secretion, but the actual effect size depends on the investigated protein. Additionally, the chaperone DnaK is important for BPN' secretion, while AmyE or AmyL secretion are not affected by a dnaK deletion. Further, we assessed the induction of secretion stress responses in mutant strains by examining AmyE- and AmyL-dependent induction of the quality control proteases HtrA and HtrB. Interestingly, the deletion of certain sip genes revealed a strong differential impact of particular signal peptidases on the magnitude of the secretion stress response.

conclusionsThe results of the present study highlight the importance of SecDF, SecG and RasP for protein secretion and reveal unexpected differences in the induction of the secretion stress response in different mutant strains.

Indexed as

Secretory PathwayAdenosine Triphosphatasesalpha-AmylasesBacillus subtilisBacterial ProteinsCell MembraneGene Expression Regulation, BacterialMembrane Transport ProteinsMolecular ChaperonesPeptide HydrolasesProtein TransportSEC Translocation ChannelsSerine EndopeptidasesAdenosine Triphosphatasesalpha-AmylasesBacterial ProteinsDnaK protein, Brevibacillus choshinensisMembrane Transport ProteinsMolecular ChaperonesPeptide HydrolasessecD protein, BacteriaSEC Translocation ChannelsSerine EndopeptidasesYkdA protein, Bacillus subtilisYvtA protein, Bacillus subtilisBacillus subtilisDnaKHtrAHtrBProtein productionProtein translocationRasPSecDFSecGSecretion stress

Identifiers

PMID32111210
PMCPMC7048088
OpenAlexW3012763584

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.