Evidence map›Paper›PMID 32110807›Full record

ArticleBioscience reports2020

Bioinformatics analysis and genetic polymorphisms in genomic region of the bovine SH2B2 gene and their associations with molecular breeding for body size traits in qinchuan beef cattle.

Sayed Haidar Abbas Raza, Rajwali Khan, Linsheng Gui, Nicola M Schreurs, Xiaoyu Wang, Chugang Mei, Xinran Yang, Cheng Gong, Linsen Zan

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

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  10. Multi-Thoracolumbar Variations andAnimals : an open access journal from MDPI · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Sayed Haidar Abbas RazaCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
Rajwali KhanCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
Linsheng GuiState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, Qinghai Province 810016, People's Republic of China.
Nicola M SchreursAnimal Science, School of Agriculture and Environment, Massey University, 4442 Palmerston North, New Zealand.
Xiaoyu WangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
Chugang MeiCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
Xinran YangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
Cheng GongCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
Linsen ZanCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
Northwest A&F University · CNMassey University · NZNational Beef Cattle Industrial Technology System · CNQinghai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Src homology 2 B 2 (SH2B2) gene regulate energy balance and body weight at least partially by enhancing Janus kinase-2 (JAK2)-mediated cytokine signaling, including leptin and/or GH signaling. Leptin is an adipose hormone that controls body weight. The objective of the present study is to evaluate the association between body measurement traits and SH2B2 gene polymorphisms as responsible mutations. For this purpose, we selected four single-nucleotide polymorphisms (SNPs) in SH2B2 gene, including two in intron 5 (g.20545A>G, and g.20570G>A, one synonymous SNP g.20693T>C, in exon 6 and one in intron 8 (g.24070C>A, and genotyped them in Qinchuan cattle. SNPs in sample populations were in medium polymorphism level (0.250<PIC<0.500). Association study indicated that the g.20570G>A, g.20693T>C, and g.24070C>A, significantly (P < 0.05) associated with body length (BL) and chest circumference (CC) in Qinchuan cattle. In addition, H4H3 and H5H5 diplotype had highly significantly (P < 0.01) greater body length (BL), rump length (RL), and chest circumference (CC) than H4H2. Our investigation will not only extend the spectrum of genetic variation of bovine SH2B2 gene, but also provide useful information for the marker assisted selection in beef cattle breeding program.

Indexed as

Adaptor Proteins, Signal TransducingAllelesAnimalsBody SizeBody WeightBreedingCattleComputational BiologyGene FrequencyGenetic Association StudiesGenomicsGenotypeHaplotypesPolymorphism, Single NucleotideSequence Analysis, DNAAdaptor Proteins, Signal Transducingbody measurementpolymorphismQinchuan cattleSH2B2 Gene

Identifiers

PMID32110807
PMCPMC7069895
OpenAlexW3006929370

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.