Evidence map›Paper›PMID 32108210›Full record

ArticleJournal of materials chemistry. B2020

An in vitro tissue model for screening sustained release of phosphate-based therapeutic attenuation of pathogen-induced proteolytic matrix degradation.

Marja B Pimentel, Fernando T P Borges, Fouad Teymour, Olga Y Zaborina, John C Alverdy, Kuili Fang, Seok Hoon Hong, Austeja Staneviciute, Yusheng J He, Georgia Papavasiliou

Open access · greenAbstract read
In one paragraph

Article in Journal of materials chemistry. B, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Pirfenidone Attenuates Fibrosis and Neovascularization in 3D Spheroid-Laden Hydrogel Culture.Journal of tissue engineering and regenerative medicine · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Marja B PimentelDepartment of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA. papavasiliou@iit.edu.ORCID 0000-0001-8624-8602
Fernando T P BorgesDepartment of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA.
Fouad TeymourDepartment of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA.
Olga Y ZaborinaDepartment of Surgery, University of Chicago, Chicago, Illinois, USA.
John C AlverdyDepartment of Surgery, University of Chicago, Chicago, Illinois, USA.
Kuili FangDepartment of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA.ORCID 0000-0002-4215-8768
Seok Hoon HongDepartment of Chemical and Biological Engineering, Illinois Institute of Technology, Chicago, IL, USA.
Austeja StaneviciuteDepartment of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA. papavasiliou@iit.edu.
Yusheng J HeDepartment of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA. papavasiliou@iit.edu.ORCID 0000-0001-6069-3935
Georgia PapavasiliouDepartment of Biomedical Engineering, Illinois Institute of Technology, Chicago, IL, USA. papavasiliou@iit.edu.ORCID 0000-0002-6730-7360
Illinois Institute of Technology · USUniversity of Chicago · US

Funding

PSEUDOMONAS'EFFECTS ON THE GUT BARRIER FROM SURGERYR01GM062344 · NIGMS · UNIVERSITY OF CHICAGO · PI ALVERDY, JOHN C · 2001 to 2025
$9.2M
Polyphosphate Loaded Nanoparticles for Suppression of Gut Pathogen Collagenase Activity and Promotion of Post-Surgical Intestinal HealingR21AI124037 · NIAID · ILLINOIS INSTITUTE OF TECHNOLOGY · PI PAPAVASILIOU, GEORGIA · 2016 to 2017
$411k
NIAID NIH HHS R21 AI124037NIGMS NIH HHS R01 GM062344
6 · The paper itself

Abstract

Tissue response to intestinal injury or disease releases pro-inflammatory host stress signals triggering microbial shift to pathogenic phenotypes. One such phenotype is increased protease production resulting in collagen degradation and activation of host matrix metalloproteinases contributing to tissue breakdown. We have shown that surgical injury depletes local intestinal phosphate concentration triggering bacterial virulence and that polyphosphate replenishment attenuates virulence and collagenolytic activity. Mechanistic studies of bacterial and host protease expression contributing to tissue breakdown are difficult to achieve in vivo necessitating the development of novel in vitro tissue models. Common techniques for screening in vitro protease activity, including gelatin zymography or fluorogenic protease-sensitive substrate kits, do not readily translate to 3D matrix degradation. Here, we report the application of an in vitro assay in which collagenolytic pathogens are cultured in the presence of a proteolytically degradable poly(ethylene) glycol scaffold and a non-degradable phosphate and/or polyphosphate nanocomposite hydrogel matrix. This in vitro platform enables quantification of pathogen-induced matrix degradation and screening of sustained release of phosphate-based therapeutic efficacy in attenuating protease expression. To evaluate matrix degradation as a function of bacterial enzyme levels secreted, we also present a novel method to quantify hydrogel degradation. This method involves staining protease-sensitive hydrogels with Sirius red dye to correlate absorbance of the degraded gel solution with hydrogel weight. This assay enables continuous monitoring and greater accuracy of hydrogel degradation kinetics compared to gravimetric measurements. Combined, the proposed in vitro platform and the presented degradation assay provide a novel strategy for screening efficacy of therapeutics in attenuating bacterial protease-induced matrix degradation.

Indexed as

Drug Evaluation, PreclinicalEnterococcus faecalisExtracellular MatrixHumansHydrogelsMatrix Metalloproteinase 9Particle SizePeptide HydrolasesPhosphatesPolyethylene GlycolsPseudomonas aeruginosaSerratia marcescensSurface PropertiesTissue EngineeringHydrogelsMatrix Metalloproteinase 9Peptide HydrolasesPhosphatesPolyethylene Glycols

Identifiers

PMID32108210
PMCPMC7183213
OpenAlexW3009034812

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.