Evidence map›Paper›PMID 32108137›Full record

ArticleScientific reports2020

Genomic divergence reveals unique populations among Indian Yaks.

Jayakumar Sivalingam, M R Vineeth, T Surya, Karanveer Singh, S P Dixit, S K Niranjan, M S Tantia, I D Gupta, D Ravikumar

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Deciphering genetic diversity and selection footprints in Rathi cattle through ddRAD-based genome-wide analysis.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
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  6. Polymorphisms ofAnimals : an open access journal from MDPI · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jayakumar SivalingamICAR-National Bureau of Animal Genetic Resources, Karnal, Haryana, India. jeyvet@gmail.com.
M R VineethAnimal Genetics & Breeding Division, ICAR-National Dairy Research Institute, Karnal, Haryana, India.ORCID http://orcid.org/0000-0002-7101-6363
T SuryaAnimal Genetics & Breeding Division, ICAR-National Dairy Research Institute, Karnal, Haryana, India.ORCID http://orcid.org/0000-0001-8320-9894
Karanveer SinghICAR-National Bureau of Animal Genetic Resources, Karnal, Haryana, India.
S P DixitICAR-National Bureau of Animal Genetic Resources, Karnal, Haryana, India.
S K NiranjanICAR-National Bureau of Animal Genetic Resources, Karnal, Haryana, India.
M S TantiaICAR-National Bureau of Animal Genetic Resources, Karnal, Haryana, India.
I D GuptaAnimal Genetics & Breeding Division, ICAR-National Dairy Research Institute, Karnal, Haryana, India.
D RavikumarAnimal Genetics & Breeding Division, ICAR-National Dairy Research Institute, Karnal, Haryana, India.
National Bureau of Animal Genetic Resources · INNational Dairy Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study focused upon identification of genome-wide SNPs through the reduced representation approach and to study the genomic divergence of the Indian yak populations. A total of 80 samples belonging to Arunachali yak (N = 20), Himachali yak (N = 20), Ladakhi yak (N = 20) and Sikkimi yak (N = 20) of India were used in the study. The results of the study revealed a total of 579575 high quality SNPs along with 50319 INDELs in the Indian yaks. The observed heterozygosity was found to be high in Himachali yak, followed by Arunachali yak, Ladakhi yak and Sikkimi yaks. The Sikkimi yaks was found to be genetically distant, followed by Ladakhi yaks which was observed to have some few individuals from Arunachali and Himachali yaks. Arunachali and Himachali yaks are found to get clustered together and are genetically similar. The study provides evidence about the genomic diversity in the Indian yak populations and information generated in the present study may help to formulate a suitable breeding plan for endangered Indian yaks. Moreover, the unique yak populations identified in the study will further help to focus attention for future characterization and prioritization of the animals for conservation purposes through the ddRAD approach.

Indexed as

AnimalsCattleEvolution, MolecularGenomeGenomicsIndiaPhylogenyPolymorphism, Single Nucleotide

Identifiers

PMID32108137
PMCPMC7046631
OpenAlexW3009305908

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.