Evidence map›Paper›PMID 32107512›Full record

ArticleChemical communications (Cambridge, England)2020

Engineering bromodomains with a photoactive amino acid by engaging 'Privileged' tRNA synthetases.

Shana Wagner, Babu Sudhamalla, Philip Mannes, Sushma Sappa, Sam Kavoosi, Debasis Dey, Sinan Wang, Kabirul Islam

Abstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Genetically encoded crosslinkers to address protein-protein interactions.Protein science : a publication of the Protein Society · 2023
    Review
  2. Development of a single cultureJournal of fluorine chemistry · 2022
    Article
  3. Article
  4. Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shana WagnerDepartment of Chemistry, University of Pittsburgh, Pittsburgh, PA 15260, USA. kai27@pitt.edu.
Babu Sudhamalla
Philip Mannes
Sushma Sappa
Sam Kavoosi
Debasis Dey
Sinan Wang
Kabirul Islam

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Jessie Nedrow · 1988 to 2026
$158.0M
TRAINING PROGRAM FOR MD/PHD STUDENTST32GM008208 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI STEINMAN, RICHARD A · 1987 to 2021
$15.4M
Site-Specific Photochemistry on Epigenetic Readers for Interactome ProfilingR01GM123234 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISLAM, KABIRUL · 2017 to 2021
$1.5M
Crosslinking-Assisted Substrate Identification for Lysine DemethylasesR01GM130752 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISLAM, KABIRUL · 2020 to 2023
$1.2M
NCI NIH HHS P30 CA047904NIGMS NIH HHS R01 GM123234NIGMS NIH HHS R01 GM130752NIGMS NIH HHS T32 GM008208
6 · The paper itself

Abstract

Site-specific placement of unnatural amino acids, particularly those responsive to light, offers an elegant approach to control protein function and capture their fleeting 'interactome'. Herein, we have resurrected 4-(trifluoromethyldiazirinyl)-phenylalanine, an underutilized photo-crosslinker, by introducing several key features including easy synthetic access, site-specific incorporation by 'privileged' synthetases and superior crosslinking efficiency, to develop photo-crosslinkable bromodomains suitable for 'interactome' profiling.

Indexed as

Protein EngineeringAmino AcidsAmino Acyl-tRNA SynthetasesCross-Linking ReagentsMolecular StructurePhenylalaninePhotochemical ProcessesAmino AcidsAmino Acyl-tRNA SynthetasesCross-Linking ReagentsPhenylalanine

Identifiers

PMID32107512
PMCPMC7146825

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.